Identification of alternative topological domains in chromatin (Q33603844)

28 July 2017

title

Identification of alternative topological domains in chromatin (English)

1 reference

28 July 2017

2

Rob Patro

1 reference

28 July 2017

Darya Filippova

1

1 reference

28 July 2017

Geet Duggal

series ordinal

3

1 reference

28 July 2017

Carl Kingsford

series ordinal

4

1 reference

28 July 2017

publication date

3 May 2014

1 reference

Algorithms for Molecular Biology

28 July 2017

published in

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28 July 2017

volume

9

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28 July 2017

page(s)

14

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Higher-order chromatin domains link eQTLs with the expression of far-away genes

28 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

Genome architecture: domain organization of interphase chromosomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

The hierarchy of the 3D genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

Functional implications of genome topology.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

Chromosomal domains: epigenetic contexts and functional implications of genomic compartmentalization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

Coral: an integrated suite of visualizations for comparing clusterings

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

Global changes in the nuclear positioning of genes and intra- and interdomain genomic interactions that orchestrate B cell fate

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

The radial nuclear positioning of genes correlates with features of megabase-sized chromatin domains.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

Gene density, transcription, and insulators contribute to the partition of the Drosophila genome into physical domains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

A map of the cis-regulatory sequences in the mouse genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

Topological domains in mammalian genomes identified by analysis of chromatin interactions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

Three-dimensional folding and functional organization principles of the Drosophila genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

A decade of 3C technologies: insights into nuclear organization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

High order chromatin architecture shapes the landscape of chromosomal alterations in cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4019371

Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1748-7188-9-14

Exploring long-range genome interactions using the WashU Epigenome Browser

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1748-7188-9-14

21 January 2018

Identifiers

DOI

10.1186/1748-7188-9-14

1 reference

journals/almob/FilippovaPDK14

28 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

28 July 2017

1 reference