The GAA*TTC triplet repeat expanded in Friedreich's ataxia impedes transcription elongation by T7 RNA polymerase in a length and supercoil dependent manner (Q33616633)

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English	The GAA*TTC triplet repeat expanded in Friedreich's ataxia impedes transcription elongation by T7 RNA polymerase in a length and supercoil dependent manner	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

The GAA*TTC triplet repeat expanded in Friedreich's ataxia impedes transcription elongation by T7 RNA polymerase in a length and supercoil dependent manner (English)

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Friedreich ataxia

1 reference

based on heuristic

inferred from title

author name string

Grabczyk E

1

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Usdin K

2

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

language of work or name

0 references

publication date

1 July 2000

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

28

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

14

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

2815-2822

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Pausing and termination by bacteriophage T7 RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

The GAA triplet-repeat expansion in Friedreich ataxia interferes with transcription and may be associated with an unusual DNA structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

On the evolution of the single-subunit RNA polymerases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Frataxin is reduced in Friedreich ataxia patients and is associated with mitochondrial membranes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Evolution of the Friedreich's ataxia trinucleotide repeat expansion: founder effect and premutations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Kinetic mechanism of transcription initiation by bacteriophage T7 RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Intrinsic termination of T7 RNA polymerase mediated by either RNA or DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Clinical and genetic abnormalities in patients with Friedreich's ataxia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

The relationship between trinucleotide (GAA) repeat length and clinical features in Friedreich ataxia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Large-scale purification of plasmid DNA for biophysical and molecular biology studies.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Friedreich's ataxia: autosomal recessive disease caused by an intronic GAA triplet repeat expansion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Structure and function of the bacteriophage T7 RNA polymerase (or, the virtues of simplicity)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Triplex DNA structures.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Stability of triple helices containing RNA and DNA strands: experimental and molecular modeling studies.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Intramolecular DNA triplexes in supercoiled plasmids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Magnesium ion-dependent triple-helix structure formed by homopurine-homopyrimidine sequences in supercoiled plasmid DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Abundance and degree of dispersion of genomic d(GA)n.d(TC)n sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

The chemistry and biology of unusual DNA structures adopted by oligopurine.oligopyrimidine sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Transcription generates positively and negatively supercoiled domains in the template.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Supercoiling of the DNA template during transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Topology and formation of triple-stranded H-DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

The influence of an alternate template conformation on elongating phage T7 RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Distribution of simple repetitive (TG/CA)n and (CT/AG)n sequences in human and rodent genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Induction of RNA-stabilized DMA conformers by transcription of an immunoglobulin switch region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Distribution of Polypyrimidine . Polypurine Segments in DNA from Diverse Organisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

21 June 2018

Sticky DNA: self-association properties of long GAA.TTC repeats in R.R.Y triplex structures from Friedreich's ataxia.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

30 October 2018

Inhibitory effects of expanded GAA.TTC triplet repeats from intron I of the Friedreich ataxia gene on transcription and replication in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

30 October 2018

Cloning, characterization, and properties of seven triplet repeat DNA sequences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

30 October 2018

A long purine-pyrimidine homopolymer acts as a transcriptional diode

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102661

30 October 2018

GAA instability in Friedreich's Ataxia shares a common, DNA-directed and intraallelic mechanism with other trinucleotide diseases

1 reference

https://pubmed.ncbi.nlm.nih.gov/10908340

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Generation of microgram quantities of trinucleotide repeat tracts of defined length, interspersion pattern, and orientation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10908340

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The high-resolution structure of the triplex formed by the GAA/TTC triplet repeat associated with Friedreich's ataxia

1 reference

https://pubmed.ncbi.nlm.nih.gov/10908340

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single strands, triple strands, and kinks in H-DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/10908340

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural polymorphism of homopurine-homopyrimidine sequences at neutral pH

1 reference

https://pubmed.ncbi.nlm.nih.gov/10908340

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Frataxin fracas

1 reference

https://pubmed.ncbi.nlm.nih.gov/10908340

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phenotypic variability in Friedreich ataxia: role of the associated GAA triplet repeat expansion

1 reference

https://pubmed.ncbi.nlm.nih.gov/10908340

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reaction of diethyl pyrocarbonate with nucleic acid components. Adenosine

1 reference

https://pubmed.ncbi.nlm.nih.gov/10908340

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dynamic, Sequence-dependent DNA Structure as Exemplified by Cruciform Extrusion from Inverted Repeats in Negatively Supercoiled DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/10908340

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptional block caused by a negative supercoiling induced structural change in an alternating CG sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/10908340

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptional properties of RNA polymerase II within triplet repeat-containing DNA from the human myotonic dystrophy and fragile X loci

1 reference

https://pubmed.ncbi.nlm.nih.gov/10908340

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/28.14.2815

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

ResearchGate publication ID

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