Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara (Q33644210)

28 July 2017

title

Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara (English)

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Purificación López-García

28 July 2017

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object named as

Purificación López-García

4

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author name string

Achim Quaiser

1

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28 July 2017

Yvan Zivanovic

2

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28 July 2017

David Moreira

3

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28 July 2017

publication date

29 July 2010

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28 July 2017

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28 July 2017

volume

5

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28 July 2017

issue

2

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28 July 2017

page(s)

285-304

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CO dehydrogenase genes found in metagenomic fosmid clones from the deep mediterranean sea.

28 July 2017

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Biogeographical distribution and diversity of bacterial and archaeal communities within highly polluted anoxic marine sediments from the Marmara Sea.

21 June 2018

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21 June 2018

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Multiple bacterial symbionts in two species of co-occurring gutless oligochaete worms from Mediterranean sea grass sediments.

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Hindsight in the relative abundance, metabolic potential and genome dynamics of uncultivated marine archaea from comparative metagenomic analyses of bathypelagic plankton of different oceanic regions

21 June 2018

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21 June 2018

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Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota

21 June 2018

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Diversity, ecology, and genomics of the Roseobacter clade: a short overview.

21 June 2018

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Latitudinal trends of Crenarchaeota and Bacteria in the meso- and bathypelagic water masses of the Eastern North Atlantic

21 June 2018

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A 3-hydroxypropionate/4-hydroxybutyrate autotrophic carbon dioxide assimilation pathway in Archaea

21 June 2018

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Primary producing prokaryotic communities of brine, interface and seawater above the halocline of deep anoxic lake L'Atalante, Eastern Mediterranean Sea.

21 June 2018

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Fosmids of novel marine Planctomycetes from the Namibian and Oregon coast upwelling systems and their cross-comparison with planctomycete genomes.

21 June 2018

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21 June 2018

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21 June 2018

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Metagenomics of the deep Mediterranean, a warm bathypelagic habitat

21 June 2018

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Feast and famine--microbial life in the deep-sea bed.

21 June 2018

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21 June 2018

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Quantitative Phylogenetic Assessment of Microbial Communities in Diverse Environments

21 June 2018

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21 June 2018

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Distribution, diversity and ecology of aerobic CO-oxidizing bacteria

21 June 2018

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21 June 2018

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Archaea predominate among ammonia-oxidizing prokaryotes in soils

21 June 2018

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21 June 2018

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21 June 2018

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Environmental biology of the marine Roseobacter lineage

21 June 2018

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21 June 2018

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Deciphering the evolution and metabolism of an anammox bacterium from a community genome

21 June 2018

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Toward Automatic Reconstruction of a Highly Resolved Tree of Life

21 June 2018

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Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea

21 June 2018

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Community genomics among stratified microbial assemblages in the ocean's interior

21 June 2018

1 reference

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Metagenomic analysis of mesopelagic Antarctic plankton reveals a novel deltaproteobacterial group

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105693

Bacterial community composition in different sediments from the Eastern Mediterranean Sea: a comparison of four 16S ribosomal DNA clone libraries

21 June 2018

1 reference

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The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes

21 June 2018

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Isolation of an autotrophic ammonia-oxidizing marine archaeon

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105693

Metagenomic marine nitrogen fixation--feast or famine?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105693

Comparative metagenomics of microbial communities

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105693

Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105693

RETRACTED: TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics

21 June 2018

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Environmental genome shotgun sequencing of the Sargasso Sea

21 June 2018

1 reference

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21 June 2018

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21 June 2018

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A conspicuous nickel protein in microbial mats that oxidize methane anaerobically

21 June 2018

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21 June 2018

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The COG database: an updated version includes eukaryotes

21 June 2018

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Complete genome sequence of the marine planctomycete Pirellula sp. strain 1

21 June 2018

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TM4: a free, open-source system for microarray data management and analysis

21 June 2018

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Diversity of free-living prokaryotes from a deep-sea site at the Antarctic Polar Front

21 June 2018

1 reference

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Archaeal dominance in the mesopelagic zone of the Pacific Ocean

21 June 2018

1 reference

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Population structure and phylogenetic characterization of marine benthic Archaea in deep-sea sediments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105693

Screening of a fosmid library of marine environmental genomic DNA fragments reveals four clones related to members of the order Planctomycetales

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105693

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

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A novel delta-subdivision proteobacterial lineage from the lower ocean surface layer

21 June 2018

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TreeView: an application to display phylogenetic trees on personal computers

21 June 2018

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Role of carbon monoxide dehydrogenase in the autotrophic pathway used by acetogenic bacteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105693

Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105693

Systematic artifacts in metagenomes from complex microbial communities.

21 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.113

Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.113

Abundance and activity of Chloroflexi-type SAR202 bacterioplankton in the meso- and bathypelagic waters of the (sub)tropical Atlantic

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.113

Cold seeps along the main Marmara Fault in the Sea of Marmara (Turkey)

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.113

Gas emissions and active tectonics within the submerged section of the North Anatolian Fault zone in the Sea of Marmara

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2010.113

21 January 2018

Identifiers

DOI

10.1038/ISMEJ.2010.113

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Dimensions Publication ID

28 July 2017

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28 July 2017

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