Rad52/Rad59-dependent recombination as a means to rectify faulty Okazaki fragment processing. (Q33652233)

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13 March 2020

title

Rad52/Rad59-dependent recombination as a means to rectify faulty Okazaki fragment processing (English)

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13 March 2020

7

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13 March 2020

author name string

Miju Lee

1

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13 March 2020

Chul-Hwan Lee

2

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13 March 2020

Annie Albert Demin

3

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13 March 2020

Palinda Ruvan Munashingha

4

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13 March 2020

Tamir Amangyeld

5

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13 March 2020

Buki Kwon

6

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13 March 2020

Yeon-Soo Seo

8

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13 March 2020

language of work or name

English

0 references

publication date

7 April 2014

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13 March 2020

number of pages

16

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Journal of Biological Chemistry

inferred from page(s)

published in

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13 March 2020

volume

289

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13 March 2020

issue

21

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13 March 2020

page(s)

15064-15079

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Alleles of the homologous recombination gene, RAD59, identify multiple responses to disrupted DNA replication in Saccharomyces cerevisiae

13 March 2020

cites work

1 reference

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Unligated Okazaki Fragments Induce PCNA Ubiquitination and a Requirement for Rad59-Dependent Replication Fork Progression.

21 June 2018

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Mammalian DNA2 helicase/nuclease cleaves G-quadruplex DNA and is required for telomere integrity

21 June 2018

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21 June 2018

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Lagging strand maturation factor Dna2 is a component of the replication checkpoint initiation machinery

21 June 2018

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The N-terminal 45-kDa domain of Dna2 endonuclease/helicase targets the enzyme to secondary structure DNA

21 June 2018

1 reference

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Role of Saw1 in Rad1/Rad10 complex assembly at recombination intermediates in budding yeast

21 June 2018

1 reference

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The trans-autostimulatory activity of Rad27 suppresses dna2 defects in Okazaki fragment processing

21 June 2018

1 reference

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Double-strand break end resection and repair pathway choice

21 June 2018

1 reference

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Roles of RSC, Rad59, and cohesin in double-strand break repair

21 June 2018

1 reference

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Cell cycle regulation of DNA double-strand break end resection by Cdk1-dependent Dna2 phosphorylation

21 June 2018

1 reference

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RSC facilitates Rad59-dependent homologous recombination between sister chromatids by promoting cohesin loading at DNA double-strand breaks.

21 June 2018

1 reference

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Coordination of DNA replication and recombination activities in the maintenance of genome stability

21 June 2018

1 reference

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HDACs link the DNA damage response, processing of double-strand breaks and autophagy

21 June 2018

1 reference

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BLM-DNA2-RPA-MRN and EXO1-BLM-RPA-MRN constitute two DNA end resection machineries for human DNA break repair

21 June 2018

1 reference

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Okazaki fragment maturation: nucleases take centre stage

21 June 2018

1 reference

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Saccharomyces cerevisiae Mre11/Rad50/Xrs2 and Ku proteins regulate association of Exo1 and Dna2 with DNA breaks

21 June 2018

1 reference

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DNA end resection by Dna2–Sgs1–RPA and its stimulation by Top3–Rmi1 and Mre11–Rad50–Xrs2

21 June 2018

1 reference

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Genetic and functional interactions between Mus81-Mms4 and Rad27.

21 June 2018

1 reference

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Defective resection at DNA double-strand breaks leads to de novo telomere formation and enhances gene targeting

21 June 2018

1 reference

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Dna2 on the road to Okazaki fragment processing and genome stability in eukaryotes

21 June 2018

1 reference

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Involvement of Vts1, a structure-specific RNA-binding protein, in Okazaki fragment processing in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Role of the Rad52 amino-terminal DNA binding activity in DNA strand capture in homologous recombination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

DNA end resection: many nucleases make light work

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

The ELG1 clamp loader plays a role in sister chromatid cohesion

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

The Elg1-RFC clamp-loading complex performs a role in sister chromatid cohesion

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Rad52 promotes second-end DNA capture in double-stranded break repair to form complement-stabilized joint molecules

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

The MPH1 gene of Saccharomyces cerevisiae functions in Okazaki fragment processing

21 June 2018

1 reference

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Significance of the dissociation of Dna2 by flap endonuclease 1 to Okazaki fragment processing in Saccharomyces cerevisiae

21 June 2018

1 reference

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Smc5/6 maintains stalled replication forks in a recombination-competent conformation.

21 June 2018

1 reference

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Polymerase dynamics at the eukaryotic DNA replication fork

21 June 2018

1 reference

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Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends

21 June 2018

1 reference

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Interaction with RPA is necessary for Rad52 repair center formation and for its mediator activity

21 June 2018

1 reference

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Processing of G4 DNA by Dna2 helicase/nuclease and replication protein A (RPA) provides insights into the mechanism of Dna2/RPA substrate recognition

21 June 2018

1 reference

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Microarray-based genetic screen defines SAW1, a gene required for Rad1/Rad10-dependent processing of recombination intermediates

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Homologous recombination in DNA repair and DNA damage tolerance

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Genome-wide analysis of Rad52 foci reveals diverse mechanisms impacting recombination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Paradigms for the three rs: DNA replication, recombination, and repair

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Rad51-independent interchromosomal double-strand break repair by gene conversion requires Rad52 but not Rad55, Rad57, or Dmc1.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

A network of multi-tasking proteins at the DNA replication fork preserves genome stability

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

In vivo and in vitro studies of Mgs1 suggest a link between genome instability and Okazaki fragment processing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

The histone code at DNA breaks: a guide to repair?

21 June 2018

1 reference

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DNA polymerases that propagate the eukaryotic DNA replication fork

21 June 2018

1 reference

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Genetic network interactions among replication, repair and nuclear pore deficiencies in yeast

21 June 2018

1 reference

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Recombination proteins in yeast

21 June 2018

1 reference

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Fission yeast Dna2 is required for generation of the telomeric single-strand overhang

21 June 2018

1 reference

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A Role for the RSC chromatin remodeler in regulating cohesion of sister chromatid arms.

21 June 2018

1 reference

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Human and yeast Rad52 proteins promote DNA strand exchange

21 June 2018

1 reference

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The N-terminal DNA-binding domain of Rad52 promotes RAD51-independent recombination in Saccharomyces cerevisiae.

21 June 2018

1 reference

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The Srs2 helicase prevents recombination by disrupting Rad51 nucleoprotein filaments.

21 June 2018

1 reference

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DNA helicase Srs2 disrupts the Rad51 presynaptic filament

21 June 2018

1 reference

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Short telomeres induce a DNA damage response in Saccharomyces cerevisiae

21 June 2018

1 reference

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Role of RAD52 epistasis group genes in homologous recombination and double-strand break repair

21 June 2018

1 reference

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Okazaki fragment maturation in yeast. I. Distribution of functions between FEN1 AND DNA2.

21 June 2018

1 reference

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Okazaki fragment maturation in yeast. II. Cooperation between the polymerase and 3'-5'-exonuclease activities of Pol delta in the creation of a ligatable nick

21 June 2018

1 reference

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Structure of the single-strand annealing domain of human RAD52 protein

21 June 2018

1 reference

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Characterization of RAD51-independent break-induced replication that acts preferentially with short homologous sequences

21 June 2018

1 reference

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Rad52 protein associates with replication protein A (RPA)-single-stranded DNA to accelerate Rad51-mediated displacement of RPA and presynaptic complex formation

21 June 2018

1 reference

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Dynamic localization of an Okazaki fragment processing protein suggests a novel role in telomere replication

21 June 2018

1 reference

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Mutations in DNA replication genes reduce yeast life span

21 June 2018

1 reference

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Replication of the lagging strand: a concert of at least 23 polypeptides

21 June 2018

1 reference

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DNA replication: partners in the Okazaki two-step

21 June 2018

1 reference

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The yeast recombinational repair protein Rad59 interacts with Rad52 and stimulates single-strand annealing

21 June 2018

1 reference

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Visualization of recombination intermediates produced by RAD52-mediated single-strand annealing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

RPA governs endonuclease switching during processing of Okazaki fragments in eukaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Links between replication and recombination in Saccharomyces cerevisiae: a hypersensitive requirement for homologous recombination in the absence of Rad27 activity.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Tripartite structure of Saccharomyces cerevisiae Dna2 helicase/endonuclease

21 June 2018

1 reference

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The endonuclease activity of the yeast Dna2 enzyme is essential in vivo

21 June 2018

1 reference

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Genetic analyses of Schizosaccharomyces pombe dna2(+) reveal that dna2 plays an essential role in Okazaki fragment metabolism

21 June 2018

1 reference

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Initiation of genetic recombination and recombination-dependent replication

21 June 2018

1 reference

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Functional interactions among yeast Rad51 recombinase, Rad52 mediator, and replication protein A in DNA strand exchange

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

The nuclease activity of the yeast DNA2 protein, which is related to the RecB-like nucleases, is essential in vivo

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Forkhead genes in transcriptional silencing, cell morphology and the cell cycle. Overlapping and distinct functions for FKH1 and FKH2 in Saccharomyces cerevisiae

21 June 2018

1 reference

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A novel role in DNA metabolism for the binding of Fen1/Rad27 to PCNA and implications for genetic risk.

21 June 2018

1 reference

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Sir-Ku-itous routes to make ends meet

21 June 2018

1 reference

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Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Dna2 mutants reveal interactions with Dna polymerase alpha and Ctf4, a Pol alpha accessory factor, and show that full Dna2 helicase activity is not essential for growth

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Homologous recombination is required for the viability of rad27 mutants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Dna2 of Saccharomyces cerevisiae possesses a single-stranded DNA-specific endonuclease activity that is able to act on double-stranded DNA in the presence of ATP.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Rad52 forms ring structures and co-operates with RPA in single-strand DNA annealing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

DNA annealing by RAD52 protein is stimulated by specific interaction with the complex of replication protein A and single-stranded DNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Characterization of Saccharomyces cerevisiae dna2 mutants suggests a role for the helicase late in S phase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Function of yeast Rad52 protein as a mediator between replication protein A and the Rad51 recombinase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Functional analysis of point mutations in human flap endonuclease-1 active site

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Holliday junctions accumulate in replication mutants via a RecA homolog-independent mechanism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

A yeast replicative helicase, Dna2 helicase, interacts with yeast FEN-1 nuclease in carrying out its essential function

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

DNA strand annealing is promoted by the yeast Rad52 protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

A Rad52 homolog is required for RAD51-independent mitotic recombination in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Double-strand break repair in the absence of RAD51 in yeast: a possible role for break-induced DNA replication

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

A yeast gene required for DNA replication encodes a protein with homology to DNA helicases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

DNA2 Encodes a DNA Helicase Essential for Replication of Eukaryotic Chromosomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Import of proteins into mitochondria: a 70 kilodalton outer membrane protein with a large carboxy-terminal deletion is still transported to the outer membrane.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4031557

Dominant negative alleles of RAD52 reveal a DNA repair/recombination complex including Rad51 and Rad52.

21 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.548388

Interaction with Rad51 is indispensable for recombination mediator function of Rad52.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.548388

A novel yeast mutation, rad52-L89F, causes a specific defect in Rad51-independent recombination that correlates with a reduced ability of Rad52-L89F to interact with Rad59.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.548388

The RSC nucleosome-remodeling complex is required for Cohesin's association with chromosome arms

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.548388

DNA2, a new player in telomere maintenance and tumor suppression

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.548388

Dna2 helicase/nuclease causes replicative fork stalling and double-strand breaks in the ribosomal DNA of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.548388

Characterization of the Enzymatic Properties of the Yeast Dna2 Helicase/Endonuclease Suggests a New Model for Okazaki Fragment Processing

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24711454

12 December 2020

inferred from PubMed ID database lookup

Rad52 and Rad59 exhibit both overlapping and distinct functions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24711454

12 December 2020

inferred from PubMed ID database lookup

Coupling of DNA Helicase and Endonuclease Activities of Yeast Dna2 Facilitates Okazaki Fragment Processing

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24711454

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1074/JBC.M114.548388

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24711454%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24711454%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

PubMed publication ID

24711454

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24711454%20AND%20SRC:MED&resulttype=core&format=json