The modular architecture of protein-protein binding interfaces (Q33715824)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15618400%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

title

The modular architecture of protein-protein binding interfaces (English)

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6 January 2020

1

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6 January 2020

author name string

O Rahat

2

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6 January 2020

S Albeck

3

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6 January 2020

R Meged

4

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6 January 2020

O Dym

5

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6 January 2020

G Schreiber

6

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6 January 2020

language of work or name

English

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publication date

23 December 2004

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Proceedings of the National Academy of Sciences of the United States of America

6 January 2020

published in

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6 January 2020

volume

102

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6 January 2020

issue

1

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6 January 2020

page(s)

57-62

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Protein stabilization by salt bridges: concepts, experimental approaches and clarification of some misunderstandings.

6 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations

28 July 2018

1 reference

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Computational design of receptor and sensor proteins with novel functions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Topological determinants of protein folding

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Identification of side-chain clusters in protein structures by a graph spectral method.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

A systematic study of low-resolution recognition in protein--protein complexes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Automated analysis of interatomic contacts in proteins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

A graph-theoretic algorithm for comparative modeling of protein structure

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Double-mutant cycles: a powerful tool for analyzing protein structure and function

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

A potent new mode of beta-lactamase inhibition revealed by the 1.7 A X-ray crystallographic structure of the TEM-1-BLIP complex.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Structural and kinetic characterization of a beta-lactamase-inhibitor protein

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

A hot spot of binding energy in a hormone-receptor interface

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Barnase and barstar: two small proteins to fold and fit together

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Computational redesign of protein-protein interaction specificity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Identification of protein-protein interaction sites from docking energy landscapes.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Small-world view of the amino acids that play a key role in protein folding.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Structure of the interferon-receptor complex determined by distance constraints from double-mutant cycles and flexible docking

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Rational design of faster associating and tighter binding protein complexes.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Scoring docked conformations generated by rigid-body protein-protein docking.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Protein-protein recognition: exploring the energy funnels near the binding sites.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

The kinetics of protein-protein recognition.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Crystal structure of Escherichia coli TEM1 beta-lactamase at 1.8 A resolution

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Revealing the architecture of a K+ channel pore through mutant cycles with a peptide inhibitor.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=544062

Dissecting protein-protein recognition sites

30 October 2018

1 reference

12 December 2020

Superparamagnetic clustering of data

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12 December 2020

Biophysical characterization of the interaction of the beta-lactamase TEM-1 with its protein inhibitor BLIP

1 reference

12 December 2020

Different Structural and Kinetic Requirements for the Interaction of Ran with the Ran-Binding Domains from RanBP2 and Importin-β

1 reference

12 December 2020

Comparison of a structural and a functional epitope

1 reference

12 December 2020

Response Regulators CheB and CheY Exhibit Competitive Binding to the Kinase CheA

1 reference

12 December 2020

Interaction of barnase with its polypeptide inhibitor barstar studied by protein engineering

1 reference

12 December 2020

The use of double mutants to detect structural changes in the active site of the tyrosyl-tRNA synthetase (Bacillus stearothermophilus)

1 reference

12 December 2020

Evaluation of direct and cooperative contributions towards the strength of buried hydrogen bonds and salt bridges

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0407280102

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15618400%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

0 references

1 reference

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6 January 2020

PubMed publication ID

15618400

1 reference