Mechanistic heterogeneity in site recognition by the structurally homologous DNA-binding domains of the ETS family transcription factors Ets-1 and PU.1. (Q33985362)

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English	Mechanistic heterogeneity in site recognition by the structurally homologous DNA-binding domains of the ETS family transcription factors Ets-1 and PU.1.	scientific article

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Europe PubMed Central

PubMed publication ID

30 July 2017

Mechanistic heterogeneity in site recognition by the structurally homologous DNA-binding domains of the ETS family transcription factors Ets-1 and PU.1. (English)

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30 July 2017

5

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9 June 2020

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Shuo Wang

1

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9 June 2020

Miles H Linde

2

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9 June 2020

Manoj Munde

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9 June 2020

Victor D Carvalho

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9 June 2020

Gregory M K Poon

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9 June 2020

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21 June 2014

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30 July 2017

Journal of Biological Chemistry

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9 June 2020

289

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9 June 2020

31

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9 June 2020

21605-21616

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9 June 2020

Discovery of directional and nondirectional pioneer transcription factors by modeling DNase profile magnitude and shape

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Steric Mechanism of Auto-Inhibitory Regulation of Specific and Non-Specific DNA Binding by the ETS Transcriptional Repressor ETV6

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Structure-dependent inhibition of the ETS-family transcription factor PU.1 by novel heterocyclic diamidines

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Mechanisms of in vivo binding site selection of the hematopoietic master transcription factor PU.1.

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NFAT5 in cellular adaptation to hypertonic stress - regulations and functional significance

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Regulation of the nucleosome unwrapping rate controls DNA accessibility.

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Sequence discrimination by DNA-binding domain of ETS family transcription factor PU.1 is linked to specific hydration of protein-DNA interface

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ATF3 protects against atherosclerosis by suppressing 25-hydroxycholesterol-induced lipid body formation

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Gene expression induced by Toll-like receptors in macrophages requires the transcription factor NFAT5

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Pioneer transcription factors: establishing competence for gene expression

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A quantitative model of nucleosome dynamics.

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Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

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Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

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5 July 2018

DNA binding by the ETS protein TEL (ETV6) is regulated by autoinhibition and self-association

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Combined genome-wide expression profiling and targeted RNA interference in primary mouse macrophages reveals perturbation of transcriptional networks associated with interferon signalling

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ETS gene fusions in prostate cancer

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5 July 2018

Transcriptomic profiling identifies a PU.1 regulatory network in macrophages

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RAPIDO: a web server for the alignment of protein structures in the presence of conformational changes.

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5 July 2018

Predicting ultraviolet spectrum of single stranded and double stranded deoxyribonucleic acids

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5 July 2018

Tonicity-regulated gene expression

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5 July 2018

enoLOGOS: a versatile web tool for energy normalized sequence logos

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5 July 2018

NFAT proteins: key regulators of T-cell development and function

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The structural and dynamic basis of Ets-1 DNA binding autoinhibition.

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NFAT5/TonEBP mutant mice define osmotic stress as a critical feature of the lymphoid microenvironment

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5 July 2018

ATM, a DNA damage-inducible kinase, contributes to activation by high NaCl of the transcription factor TonEBP/OREBP.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4118120

5 July 2018

Unique and selective effects of five Ets family members, Elf3, Ets1, Ets2, PEA3, and PU.1, on the promoter of the type II transforming growth factor-beta receptor gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4118120

5 July 2018

cAMP-independent role of PKA in tonicity-induced transactivation of tonicity-responsive enhancer/ osmotic response element-binding protein

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4118120

5 July 2018

Protein-solvent preferential interactions, protein hydration, and the modulation of biochemical reactions by solvent components

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5 July 2018

Structural studies of Ets-1/Pax5 complex formation on DNA

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4118120

5 July 2018

Biology of EWS/ETS fusions in Ewing's family tumors

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5 July 2018

Structure of the elk-1-DNA complex reveals how DNA-distal residues affect ETS domain recognition of DNA

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Autoinhibition as a transcriptional regulatory mechanism

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Physiological significance of volume-regulatory transporters.

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5 July 2018

Structures of SAP-1 bound to DNA targets from the E74 and c-fos promoters: insights into DNA sequence discrimination by Ets proteins

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5 July 2018

Interaction between PU.1 and another Ets family transcription factor promotes macrophage-specific Basal transcription initiation.

1 reference

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The structure of GABPalpha/beta: an ETS domain- ankyrin repeat heterodimer bound to DNA

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5 July 2018

Structural coupling of the inhibitory regions flanking the ETS domain of murine Ets-1.

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Characterization of the cooperative function of inhibitory sequences in Ets-1.

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A new pattern for helix-turn-helix recognition revealed by the PU.1 ETS-domain-DNA complex

1 reference

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Solution structure of the ETS domain from murine Ets-1: a winged helix-turn-helix DNA binding motif

1 reference

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Macromolecules and water: probing with osmotic stress

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PU.1 is a component of a multiprotein complex which binds an essential site in the murine immunoglobulin lambda 2-4 enhancer

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The ets multigene family is conserved throughout the Metazoa

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Coupling of local folding to site-specific binding of proteins to DNA

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Interaction of murine ets-1 with GGA-binding sites establishes the ETS domain as a new DNA-binding motif

1 reference

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Thermodynamic stoichiometries of participation of water, cations and anions in specific and non-specific binding of lac repressor to DNA. Possible thermodynamic origins of the "glutamate effect" on protein-DNA interactions

1 reference

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5 July 2018

Ion effects on ligand-nucleic acid interactions

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5 July 2018

Regulation of B lymphocyte and macrophage development by graded expression of PU.1.

1 reference

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21 January 2018

Dynamic epigenetic enhancer signatures reveal key transcription factors associated with monocytic differentiation states.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.575340

21 January 2018

Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.575340

21 January 2018

Structures of SAP-1 Bound to DNA Targets from the E74 and c-fos Promoters

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.575340

21 January 2018

Base Coupling in Sequence-specific Site Recognition by the ETS Domain of Murine PU.1

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.575340

21 January 2018

A thermodynamic basis of DNA sequence selectivity by the ETS domain of murine PU.1.

1 reference

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21 January 2018

The sequence-specific association of the ETS domain of murine PU.1 with DNA exhibits unusual energetics

1 reference

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21 January 2018

Explicit formulation of titration models for isothermal titration calorimetry

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.575340

21 January 2018

DNA binding regulates the self-association of the ETS domain of PU.1 in a sequence-dependent manner

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.575340

21 January 2018

DNA binding specificity studies of four ETS proteins support an indirect read-out mechanism of protein-DNA recognition.

1 reference

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21 January 2018

Specific and non-specific interactions of integration host factor with DNA: thermodynamic evidence for disruption of multiple IHF surface salt-bridges coupled to DNA binding.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M114.575340

21 January 2018

Myeloid development is selectively disrupted in PU.1 null mice.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4118120

29 October 2018

Gene expression profiling in brain following acute systemic hypertonicity: novel genes possibly involved in osmoadaptation

1 reference

https://pubmed.ncbi.nlm.nih.gov/24952944

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modulation of transcription factor Ets-1 DNA binding: DNA-induced unfolding of an alpha helix

1 reference

https://pubmed.ncbi.nlm.nih.gov/24952944

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dimerization is required for phosphorylation and DNA binding of TonEBP/NFAT5

1 reference

https://pubmed.ncbi.nlm.nih.gov/24952944

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vapor pressure osmometry studies of osmolyte-protein interactions: implications for the action of osmoprotectants in vivo and for the interpretation of "osmotic stress" experiments in vitro

1 reference

https://pubmed.ncbi.nlm.nih.gov/24952944

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Backbone dynamics of a short PU.1 ETS domain

1 reference

https://pubmed.ncbi.nlm.nih.gov/24952944

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Specificity within the ets family of transcription factors

1 reference

https://pubmed.ncbi.nlm.nih.gov/24952944

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hypertonicity-induced phosphorylation and nuclear localization of the transcription factor TonEBP

1 reference

https://pubmed.ncbi.nlm.nih.gov/24952944

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M114.575340

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24952944%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24952944%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24952944%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

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