A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome (Q46808052)

25 December 2017

title

A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome (English)

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25 December 2017

3

Katrina T Forest

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Richard D. Vierstra

series ordinal

4

object named as

Richard D Vierstra

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author name string

Jeremiah R Wagner

series ordinal

1

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25 December 2017

Joseph S Brunzelle

series ordinal

2

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25 December 2017

language of work or name

English

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publication date

1 November 2005

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25 December 2017

published in

Nature

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25 December 2017

volume

438

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25 December 2017

issue

7066

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25 December 2017

page(s)

325-331

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25 December 2017

Phytochrome photosensory signalling networks

cites work

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Phylogenetic analysis of the phytochrome superfamily reveals distinct microbial subfamilies of photoreceptors

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Defining the bilin lyase domain: lessons from the extended phytochrome superfamily

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Carboxy-terminal deletion analysis of oat phytochrome A reveals the presence of separate domains required for structure and biological activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

The Pfam protein families database

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Crystal structure and interactions of the PAS repeat region of the Drosophila clock protein PERIOD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Structure of the NCoA-1/SRC-1 PAS-B domain bound to the LXXLL motif of the STAT6 transactivation domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

The biliverdin chromophore binds covalently to a conserved cysteine residue in the N-terminus of Agrobacterium phytochrome Agp1

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

A deeply knotted protein structure and how it might fold.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

An enzyme with a deep trefoil knot for the active-site architecture

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Protein knots: A tangled problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Deep trefoil knot implicated in RNA binding found in an archaebacterial protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Folding studies on a knotted protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

3D domain swapping: as domains continue to swap

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Determination of the chromophore structures in the photoinduced reaction cycle of phytochrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Isolation, crystallization, crystal structure analysis and refinement of constitutive C-phycocyanin from the chromatically adapting cyanobacterium Fremyella diplosiphon at 1.66 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Isolation, crystallization, crystal structure analysis and refinement of allophycocyanin from the cyanobacterium Spirulina platensis at 2.3 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

In vitro assembly of phytochrome B apoprotein with synthetic analogs of the phytochrome chromophore

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Resonance Raman analysis of the Pr and Pfr forms of phytochrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Sterically locked synthetic bilin derivatives and phytochrome Agp1 from Agrobacterium tumefaciens form photoinsensitive Pr- and Pfr-like adducts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Regulation of phytochrome B nuclear localization through light-dependent unmasking of nuclear-localization signals

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Phytochrome-specific type 5 phosphatase controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Biliverdin binds covalently to agrobacterium phytochrome Agp1 via its ring A vinyl side chain

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Harnessing phytochrome's glowing potential

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Biochemical properties of CikA, an unusual phytochrome-like histidine protein kinase that resets the circadian clock in Synechococcus elongatus PCC 7942.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

RcaE is a complementary chromatic adaptation photoreceptor required for green and red light responsiveness

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Cyanobacterial phytochrome-like PixJ1 holoprotein shows novel reversible photoconversion between blue- and green-absorbing forms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

A cyanobacterial phytochrome two-component light sensory system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Bacteriophytochromes are photochromic histidine kinases using a biliverdin chromophore

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Crystal structure of globular domain of histone H5 and its implications for nucleosome binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Microbatch crystallization under oil — a new technique allowing many small-volume crystallization trials

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

On symmetries of substructures

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Generation, representation and flow of phase information in structure determination: recent developments in and around SHARP 2.0

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Automated protein model building combined with iterative structure refinement

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

SOLVE and RESOLVE: automated structure solution, density modification and model building

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

XtalView/Xfit--A versatile program for manipulating atomic coordinates and electron density

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Use of TLS parameters to model anisotropic displacements in macromolecular refinement

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Protonation State and Structural Changes of the Tetrapyrrole Chromophore during the Pr→ PfrPhototransformation of Phytochrome: A Resonance Raman Spectroscopic Study†

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

Bacteriophytochromes: phytochrome-like photoreceptors from nonphotosynthetic eubacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

inferred from DOI database lookup

7 January 2021

based on heuristic

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04118

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NATURE04118

1 reference

25 December 2017

Dimensions Publication ID

1006975464

0 references

1 reference

25 December 2017