Oscillatory stimuli differentiate adapting circuit topologies (Q47711784)

http://europepmc.org/abstract/PMC/5623142

6 March 2018

title

Oscillatory stimuli differentiate adapting circuit topologies (English)

1 reference

http://europepmc.org/abstract/PMC/5623142

6 March 2018

author

Krasimira Tsaneva-Atanasova

6

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846089%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Eduardo D. Sontag

7

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10 June 2020

Sahand Jamal Rahi

1

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10 June 2020

Johannes Larsch

2

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10 June 2020

author name string

Kresti Pecani

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846089%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Alexander Y Katsov

4

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10 June 2020

Nahal Mansouri

5

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10 June 2020

Frederick R Cross

8

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10 June 2020

publication date

28 August 2017

1 reference

http://europepmc.org/abstract/PMC/5623142

6 March 2018

published in

Nature Methods

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10 June 2020

volume

14

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10 June 2020

issue

10

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846089%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

page(s)

1010-1016

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846089%20AND%20SRC:MED&resulttype=core&format=json

Optimal Regulatory Circuit Topologies for Fold-Change Detection

10 June 2020

cites work

1 reference

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Olfactory circuits and behaviors of nematodes

22 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

The CDK-APC/C Oscillator Predominantly Entrains Periodic Cell-Cycle Transcription

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Non-monotonic Response to Monotonic Stimulus: Regulation of Glyoxylate Shunt Gene-Expression Dynamics in Mycobacterium tuberculosis

22 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Oscillatory stress stimulation uncovers an Achilles' heel of the yeast MAPK signaling network

22 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

A Circuit for Gradient Climbing in C. elegans Chemotaxis

22 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

How to train your microbe: methods for dynamically characterizing gene networks

22 May 2018

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Temporal responses of C. elegans chemosensory neurons are preserved in behavioral dynamics

22 May 2018

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High-throughput imaging of neuronal activity in Caenorhabditis elegans

22 May 2018

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Cyclin-dependent kinases are regulators and effectors of oscillations driven by a transcription factor network

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Incoherent feedforward control governs adaptation of activated ras in a eukaryotic chemotaxis pathway

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Decoding GnRH neurohormone pulse frequency by convergent signalling modules

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Fold-change detection and scalar symmetry of sensory input fields

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Fourier analysis and systems identification of the p53 feedback loop

22 May 2018

1 reference

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Global entrainment of transcriptional systems to periodic inputs

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Origin of irreversibility of cell cycle start in budding yeast

22 May 2018

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Adaptive response by state-dependent inactivation

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Analysis of the mitotic exit control system using locked levels of stable mitotic cyclin

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Negative feedback governs gonadotrope frequency-decoding of gonadotropin releasing hormone pulse-frequency

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Defining network topologies that can achieve biochemical adaptation.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

A systems-level analysis of perfect adaptation in yeast osmoregulation

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Forced periodic expression of G1 cyclins phase-locks the budding yeast cell cycle

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Modeling the chemotactic response of Escherichia coli to time-varying stimuli

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Global control of cell-cycle transcription by coupled CDK and network oscillators

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

A microfluidic device for temporally controlled gene expression and long-term fluorescent imaging in unperturbed dividing yeast cells

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Mathematical and computational analysis of adaptation via feedback inhibition in signal transduction pathways

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

In vivo imaging of C. elegans ASH neurons: cellular response and adaptation to chemical repellents

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

A positive-feedback-based bistable 'memory module' that governs a cell fate decision

22 May 2018

1 reference

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Sniffers, buzzers, toggles and blinkers: dynamics of regulatory and signaling pathways in the cell

22 May 2018

1 reference

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Building a cell cycle oscillator: hysteresis and bistability in the activation of Cdc2.

22 May 2018

1 reference

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Transcriptional regulatory networks in Saccharomyces cerevisiae

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

APC-dependent proteolysis of the mitotic cyclin Clb2 is essential for mitotic exit

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Self-perpetuating states in signal transduction: positive feedback, double-negative feedback and bistability

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Serial regulation of transcriptional regulators in the yeast cell cycle

22 May 2018

1 reference

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Adaptation kinetics in bacterial chemotaxis

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

Temporal comparisons in bacterial chemotaxis

22 May 2018

1 reference

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Noise Induces Hopping between NF-κB Entrainment Modes.

22 May 2018

1 reference

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Perfect and Near-Perfect Adaptation in Cell Signaling

14 August 2018

1 reference

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Diverse sensitivity thresholds in dynamic signaling responses by social amoebae.

14 August 2018

1 reference

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The sarco-endoplasmic reticulum Ca2+ ATPase is required for development and muscle function in Caenorhabditis elegans

14 August 2018

1 reference

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Odorant-specific adaptation pathways generate olfactory plasticity in C. elegans.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5623142

14 August 2018

Identifiers

DOI

10.1038/NMETH.4408

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846089%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28846089%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

PubMed publication ID

28846089

1 reference