The RNA exosome promotes transcription termination of backtracked RNA polymerase II. (Q48268876)

10 February 2018

http://europepmc.org/abstract/MED/25240800

title

The RNA exosome promotes transcription termination of backtracked RNA polymerase II. (English)

1 reference

10 February 2018

http://europepmc.org/abstract/MED/25240800

author

Jean-François Lemay

1

1 reference

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2 June 2020

Jurg Bahler

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240800%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

6

François Bachand

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240800%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

author name string

Marc Larochelle

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240800%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

Samuel Marguerat

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240800%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

Sophie Atkinson

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240800%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

publication date

21 September 2014

1 reference

10 February 2018

http://europepmc.org/abstract/MED/25240800

published in

Nature Structural & Molecular Biology

1 reference

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2 June 2020

volume

21

1 reference

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2 June 2020

issue

10

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2 June 2020

page(s)

919-926

1 reference

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Coupling mRNA processing with transcription in time and space.

2 June 2020

cites work

1 reference

Disengaging polymerase: terminating RNA polymerase II transcription in budding yeast

21 January 2018

1 reference

Torpedo Nuclease Rat1 Is Insufficient to Terminate RNA Polymerase II in Vitro

21 January 2018

1 reference

Rat1p maintains RNA polymerase II CTD phosphorylation balance

21 January 2018

1 reference

The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.

21 January 2018

1 reference

The role of Rat1 in coupling mRNA 3'-end processing to transcription termination: implications for a unified allosteric-torpedo model

21 January 2018

1 reference

Dismantling promoter-driven RNA polymerase II transcription complexes in vitro by the termination factor Rat1.

21 January 2018

1 reference

Human 5' --> 3' exonuclease Xrn2 promotes transcription termination at co-transcriptional cleavage sites

21 January 2018

1 reference

RNA polymerase II pausing downstream of core histone genes is different from genes producing polyadenylated transcripts

21 January 2018

1 reference

A gene-specific requirement of RNA polymerase II CTD phosphorylation for sexual differentiation in S. pombe

21 January 2018

1 reference

RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes.

21 January 2018

1 reference

Pause sites promote transcriptional termination of mammalian RNA polymerase II

21 January 2018

1 reference

Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells

21 January 2018

1 reference

RNA decay machines: the exosome

21 January 2018

1 reference

Threading the barrel of the RNA exosome

21 January 2018

1 reference

The eukaryotic RNA exosome

21 January 2018

1 reference

Transcription-associated quality control of mRNP.

21 January 2018

1 reference

The RNA processing exosome is linked to elongating RNA polymerase II in Drosophila

21 January 2018

1 reference

The RNA exosome targets the AID cytidine deaminase to both strands of transcribed duplex DNA substrates

21 January 2018

1 reference

The exosome associates cotranscriptionally with the nascent pre-mRNP through interactions with heterogeneous nuclear ribonucleoproteins

21 January 2018

1 reference

Genome-wide mRNA surveillance is coupled to mRNA export

21 January 2018

1 reference

Genome-wide localization of exosome components to active promoters and chromatin insulators in Drosophila

21 January 2018

1 reference

Bimodal expression of PHO84 is modulated by early termination of antisense transcription.

21 January 2018

1 reference

lncRNA recruits RNAi and the exosome to dynamically regulate pho1 expression in response to phosphate levels in fission yeast.

21 January 2018

1 reference

Microprocessor, Setx, Xrn2, and Rrp6 co-operate to induce premature termination of transcription by RNAPII.

21 January 2018

1 reference

Importance of polyadenylation in the selective elimination of meiotic mRNAs in growing S. pombe cells.

21 January 2018

1 reference

Proteomic and functional analysis of the noncanonical poly(A) polymerase Cid14

21 January 2018

1 reference

Nrd1 interacts with the nuclear exosome for 3' processing of RNA polymerase II transcripts

21 January 2018

1 reference

Adenylation and exosome-mediated degradation of cotranscriptionally cleaved pre-messenger RNA in human cells

21 January 2018

1 reference

Endonucleolytic RNA cleavage by a eukaryotic exosome

21 January 2018

1 reference

The exosome contains domains with specific endoribonuclease, exoribonuclease and cytoplasmic mRNA decay activities.

21 January 2018

1 reference

Exo- and endoribonucleolytic activities of yeast cytoplasmic and nuclear RNA exosomes are dependent on the noncatalytic core and central channel.

21 January 2018

1 reference

RNA polymerase backtracking in gene regulation and genome instability

21 January 2018

1 reference

Structural basis of RNA polymerase II backtracking, arrest and reactivation

21 January 2018

1 reference

The RNA polymerase II ternary complex cleaves the nascent transcript in a 3'----5' direction in the presence of elongation factor SII

21 January 2018

1 reference

Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo

21 January 2018

1 reference

Evidence that transcript cleavage is essential for RNA polymerase II transcription and cell viability

21 January 2018

1 reference

Nascent transcript sequencing visualizes transcription at nucleotide resolution

21 January 2018

1 reference

Transcriptional termination signals for RNA polymerase II in fission yeast

21 January 2018

1 reference

One step back before moving forward: regulation of transcription elongation by arrest and backtracking.

21 January 2018

1 reference

Mechanism of eukaryotic RNA polymerase III transcription termination

21 January 2018

1 reference

Crystal structure of an RNA-bound 11-subunit eukaryotic exosome complex

21 January 2018

1 reference

Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest

21 January 2018

1 reference

Processing of 3'-extended read-through transcripts by the exosome can generate functional mRNAs.

21 January 2018

1 reference

The nuclear poly(A)-binding protein interacts with the exosome to promote synthesis of noncoding small nucleolar RNAs

21 January 2018

1 reference

Recombineering reagents for improved inducible expression and selection marker re-use in Schizosaccharomyces pombe

21 January 2018

1 reference

The fission yeast dis3+ gene encodes a 110-kDa essential protein implicated in mitotic control

21 January 2018

1 reference

The THO complex cooperates with the nuclear RNA surveillance machinery to control small nucleolar RNA expression.

21 January 2018

1 reference

Cohesin complex promotes transcriptional termination between convergent genes in S. pombe

21 January 2018

1 reference

High-throughput and sensitive assay to measure yeast cell growth: a bench protocol for testing genotoxic agents

21 January 2018

1 reference

Transcript mapping with high-density oligonucleotide tiling arrays

21 January 2018

1 reference

Genome-wide analysis of poly(A) site selection in Schizosaccharomyces pombe

21 January 2018

1 reference

PomBase: a comprehensive online resource for fission yeast

21 January 2018

1 reference

Differential expression analysis for sequence count data

21 January 2018

1 reference

Control of intrinsic transcription termination by N and NusA: the basic mechanisms

21 January 2018

1 reference

A Pre-mRNA degradation pathway that selectively targets intron-containing genes requires the nuclear poly(A)-binding protein

31 March 2020

1 reference

Thiamine-repressible expression vectors pREP and pRIP for fission yeast

31 March 2020

1 reference

A universal RNA polymerase II CTD cycle is orchestrated by complex interplays between kinase, phosphatase, and isomerase enzymes along genes

31 March 2020

1 reference

JBrowse: a next-generation genome browser

31 March 2020

1 reference

Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25240800

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NSMB.2893

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240800%20AND%20SRC:MED&resulttype=core&format=json

release_2zz53aof35ccpeegunfm4tagja

2 June 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/2zz53aof35ccpeegunfm4tagja

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240800%20AND%20SRC:MED&resulttype=core&format=json