Transition of a cloned d(AT)n-d(AT)n tract to a cruciform in vivo. (Q40470729)

20 September 2017

Transition of a cloned d(AT)n-d(AT)n tract to a cruciform in vivo. (English)

1 reference

20 September 2017

Haniford DB

1

1 reference

PMC publication ID

321792

20 September 2017

Pulleyblank DE

series ordinal

2

1 reference

20 September 2017

1 June 1985

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20 September 2017

21

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inferred from page(s)

published in

Nucleic Acids Research

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20 September 2017

13

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20 September 2017

12

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20 September 2017

4343-4363

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Polymorphism of DNA double helices

20 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Helical periodicity of DNA, Poly(dA) . poly(dT) and poly(dA-dT). poly(dA-dT) in solution.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Flipping of cloned d(pCpG)n.d(pCpG)n DNA sequences from right- to left-handed helical structure by salt, Co(III), or negative supercoiling

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Energetics of B-to-Z transition in DNA.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Slow cruciform transitions in palindromic DNA.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Regulation of bacterial DNA supercoiling: plasmid linking numbers vary with growth temperature

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Formation of Z-DNA in negatively supercoiled plasmids is sensitive to small changes in salt concentration within the physiological range

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Conformational flexibility of junctions between contiguous B- and Z-DNAs in supercoiled plasmids

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

DNA supercoiling: Another level for regulating gene expression

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Possible structures of homopurine-homopyrimidine S1-hypersensitive sites

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

A hypothesis on a specific sequence-dependent conformation of DNA and its relation to the binding of the lac-repressor protein

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Energy coupling in DNA gyrase and the mechanism of action of novobiocin

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Helical repeat of DNA in solution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

The problems of eukaryotic and prokaryotic DNA packaging and in vivo conformation posed by superhelix density heterogeneity

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

DNA gyrase: an enzyme that introduces superhelical turns into DNA

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Review: ethidium fluorescence assays. Part 1. Physicochemical studies

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Dynamics of cruciform extrusion in supercoiled DNA: use of a synthetic inverted repeat to study conformational populations

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Left-handed Z-DNA regions are present in negatively supercoiled bacteriophage PM2 DNA

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

A dominant role for DNA secondary structure in forming hypersensitive structures in chromatin

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

The genetic control of DNA supercoiling in Salmonella typhimurium

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Quantum mechanical study of bases interactions in various associates in atomic dipole approximation

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Isolation, characterization, and structure of the folded interphase genome of Drosophila melanogaster

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Cruciform-resolvase interactions in supercoiled DNA.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Sites required for position-effect regulation of mating-type information in yeast

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=321792

Torsional tension in the DNA double helix measured with trimethylpsoralen in living E. coli cells: analogous measurements in insect and human cells

4 November 2018

1 reference

12 December 2020

Energetic and structural inter-relationship between DNA supercoiling and the right- to left-handed Z helix transitions in recombinant plasmids

1 reference

12 December 2020

T4 endonuclease VII cleaves holliday structures

1 reference

12 December 2020

Negatively supercoiled plasmids contain left-handed Z-DNA segments as detected by specific antibody binding

1 reference

12 December 2020

Transcription of DNA injected into Xenopus oocytes is influenced by template topology

1 reference

12 December 2020

Facile transition of poly[d(TG)·d(CA)] into a left-handed helix in physiological conditions

1 reference

12 December 2020

DNA Supercoiling: Changes during Cellular Differentiation and Activation of Chromatin Transcription

1 reference

12 December 2020

Cruciform formation in a negatively supercoiled DNA may be kinetically forbidden under physiological conditions

1 reference

12 December 2020

Regulation of the genes for E. coli DNA gyrase: Homeostatic control of DNA supercoiling

1 reference

12 December 2020

Evidence of cruciform structures in superhelical DNA provided by two‐dimensional gel electrophoresis

1 reference

12 December 2020

A method for the purification ofE. coli plasmid DNA by homogeneous lysis and polyethylene glycol precipitation

1 reference

12 December 2020

Thermodynamics of the B–Z transition in superhelical DNA

1 reference

12 December 2020

Chromatin assembly in Xenopus oocytes: In vivo studies

1 reference

12 December 2020

Intervening sequences in human fetal globin genes adopt left-handed Z helices

1 reference

12 December 2020

Torsional stress promotes the DNAase I sensitivity of active genes

1 reference

12 December 2020

Thermodynamics of the ColE1 cruciform. Comparisons between probing and topological experiments using single topoisomers

1 reference

12 December 2020

Transcriptional block caused by a negative supercoiling induced structural change in an alternating CG sequence

1 reference

12 December 2020

The in-vivo occurrence of Z DNA

1 reference

12 December 2020

X-ray studies of two synthetic DNA copolymers

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/13.12.4343

1 reference

20 September 2017

1 reference

PMC publication ID

321792

20 September 2017

PubMed publication ID

4011446

1 reference

PMC publication ID

321792