PCAP: a whole-genome assembly program (Q40830110)

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English	PCAP: a whole-genome assembly program	scientific article

Statements

instance of

scholarly article

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stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

title

PCAP: a whole-genome assembly program (English)

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stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

main subject

whole genome sequencing

1 reference

based on heuristic

inferred from title

author

Shiaw-Pyng Yang

series ordinal

4

object named as

Shiaw-Pyng Yang

1 reference

stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

Srinivas Aluru

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3

object named as

Srinivas Aluru

1 reference

stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

author name string

Xiaoqiu Huang

series ordinal

1

1 reference

stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

Jianmin Wang

series ordinal

2

1 reference

stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

LaDeana Hillier

series ordinal

5

1 reference

stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

publication date

1 September 2003

1 reference

stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

published in

Genome Research

1 reference

stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

volume

13

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stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

issue

9

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stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

page(s)

2164-2170

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stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

cites work

Whole-genome sequence assembly for mammalian genomes: Arachne 2.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

24 September 2017

Initial sequencing and comparative analysis of the mouse genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

24 September 2017

Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

24 September 2017

RePS: a sequence assembler that masks exact repeats identified from the shotgun data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

24 September 2017

ARACHNE: a whole-genome shotgun assembler

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

24 September 2017

An Eulerian path approach to DNA fragment assembly

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

24 September 2017

An optimized protocol for analysis of EST sequences

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

24 September 2017

A whole-genome assembly of Drosophila

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

24 September 2017

CAP3: A DNA sequence assembly program

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

24 September 2017

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

24 September 2017

A new computer method for the storage and manipulation of DNA gel reading data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

24 September 2017

SEQAID: a DNA sequence assembling program based on a mathematical model

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

24 September 2017

The phusion assembler

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

25 September 2017

An improved sequence assembly program.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

17 June 2018

A contig assembly program based on sensitive detection of fragment overlaps

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

17 June 2018

Aligning two sequences within a specified diagonal band

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

17 June 2018

A case study in genome-level fragment assembly.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

19 August 2018

AMASS: a structured pattern matching approach to shotgun sequence assembly.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

retrieved

19 August 2018

Identifiers

DOI

10.1101/GR.1390403

1 reference

stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

PMC publication ID

403719

1 reference

stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

PubMed publication ID

12952883

1 reference

stated in

Europe PubMed Central

PMC publication ID

403719

retrieved

24 September 2017

ResearchGate publication ID

10584985

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