A complex secondary structure in U1A pre-mRNA that binds two molecules of U1A protein is required for regulation of polyadenylation (Q40874579)

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28 October 2019

title

A complex secondary structure in U1A pre-mRNA that binds two molecules of U1A protein is required for regulation of polyadenylation (English)

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28 October 2019

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6

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28 October 2019

Celia van Gelder

1

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28 October 2019

author name string

Gunderson SI

2

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28 October 2019

Jansen EJ

3

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28 October 2019

Boelens WC

4

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28 October 2019

Polycarpou-Schwarz M

5

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28 October 2019

van Venrooij WJ

7

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28 October 2019

language of work or name

English

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publication date

1 December 1993

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28 October 2019

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28 October 2019

volume

12

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28 October 2019

issue

13

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28 October 2019

page(s)

5191-5200

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The human U1 snRNP-specific U1A protein inhibits polyadenylation of its own pre-mRNA.

28 October 2019

cites work

1 reference

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An enhancer screen identifies a gene that encodes the yeast U1 snRNP A protein: implications for snRNP protein function in pre-mRNA splicing

24 September 2017

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A comprehensive set of sequence analysis programs for the VAX

24 September 2017

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GCN4, a eukaryotic transcriptional activator protein, binds as a dimer to target DNA

24 September 2017

1 reference

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cDNA cloning of the human U1 snRNA-associated A protein: extensive homology between U1 and U2 snRNP-specific proteins

24 September 2017

1 reference

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Identification of the RNA binding segment of human U1 A protein and definition of its binding site on U1 snRNA.

24 September 2017

1 reference

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CUUCGG hairpins: extraordinarily stable RNA secondary structures associated with various biochemical processes

24 September 2017

1 reference

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Probing the structure of RNAs in solution

24 September 2017

1 reference

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Structure of spliceosomal snRNPs and their role in pre-mRNA splicing

24 September 2017

1 reference

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Crystal structure of the RNA-binding domain of the U1 small nuclear ribonucleoprotein A

24 September 2017

1 reference

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Multiple domains of U1 snRNA, including U1 specific protein binding sites, are required for splicing

24 September 2017

1 reference

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Structure-probing of U1 snRNPs gradually depleted of the U1-specific proteins A, C and 70k. Evidence that A interacts differentially with developmentally regulated mouse U1 snRNA variants

24 September 2017

1 reference

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Identification of molecular contacts between the U1 A small nuclear ribonucleoprotein and U1 RNA

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413783

Structure, chromosomal localization and evolutionary conservation of the gene encoding human U1 snRNP-specific A protein

24 September 2017

1 reference

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RNA-binding domain of the A protein component of the U1 small nuclear ribonucleoprotein analyzed by NMR spectroscopy is structurally similar to ribosomal proteins

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413783

U1-snRNP-A protein selects a ten nucleotide consensus sequence from a degenerate RNA pool presented in various structural contexts

24 September 2017

1 reference

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Structural Elements in RNA

24 September 2017

1 reference

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A comparison of optimal and suboptimal RNA secondary structures predicted by free energy minimization with structures determined by phylogenetic comparison

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413783

Quantitative determination that one of two potential RNA-binding domains of the A protein component of the U1 small nuclear ribonucleoprotein complex binds with high affinity to stem-loop II of U1 RNA

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413783

Interaction of N-terminal domain of U1A protein with an RNA stem/loop

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413783

The biochemistry of 3'-end cleavage and polyadenylation of messenger RNA precursors.

24 September 2017

1 reference

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Major determinants of the specificity of interaction between small nuclear ribonucleoproteins U1A and U2B'' and their cognate RNAs

24 September 2017

1 reference

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Conserved amino acid residues within and outside of the N-terminal ribonucleoprotein motif of U1A small nuclear ribonucleoprotein involved in U1 RNA binding

17 June 2018

1 reference

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Recognition of U1 and U2 small nuclear RNAs can be altered by a 5-amino-acid segment in the U2 small nuclear ribonucleoprotein particle (snRNP) B" protein and through interactions with U2 snRNP-A' protein

17 June 2018

1 reference

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17 Predicting optimal and suboptimal secondary structure for RNA

17 June 2018

1 reference

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A guide for probing native small nuclear RNA and ribonucleoprotein structures

17 June 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8262062

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

1 reference

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28 October 2019

PubMed publication ID

8262062

1 reference