Genomic characterization of Rim2/Hipa elements reveals a CACTA-like transposon superfamily with unique features in the rice genome. (Q42609591)

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scientific article published on 26 September 2003

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English	Genomic characterization of Rim2/Hipa elements reveals a CACTA-like transposon superfamily with unique features in the rice genome.	scientific article published on 26 September 2003

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Europe PubMed Central

PubMed publication ID

14513364

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14513364%20AND%20SRC:MED&resulttype=core&format=json

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19 December 2019

title

Genomic characterization of Rim2/Hipa elements reveals a CACTA-like transposon superfamily with unique features in the rice genome (English)

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Europe PubMed Central

PubMed publication ID

14513364

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14513364%20AND%20SRC:MED&resulttype=core&format=json

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19 December 2019

author

Zuhua He

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8

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Europe PubMed Central

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14513364

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14513364%20AND%20SRC:MED&resulttype=core&format=json

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19 December 2019

author name string

G-D Wang

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1

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PubMed publication ID

14513364

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14513364%20AND%20SRC:MED&resulttype=core&format=json

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19 December 2019

P-F Tian

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2

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PubMed publication ID

14513364

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14513364%20AND%20SRC:MED&resulttype=core&format=json

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19 December 2019

Z-K Cheng

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3

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14513364

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14513364%20AND%20SRC:MED&resulttype=core&format=json

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19 December 2019

G Wu

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4

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PubMed publication ID

14513364

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14513364%20AND%20SRC:MED&resulttype=core&format=json

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19 December 2019

J-M Jiang

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5

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PubMed publication ID

14513364

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14513364%20AND%20SRC:MED&resulttype=core&format=json

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19 December 2019

D-B Li

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6

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PubMed publication ID

14513364

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19 December 2019

Q Li

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7

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14513364

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19 December 2019

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English

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publication date

26 September 2003

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PubMed publication ID

14513364

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19 December 2019

published in

Molecular Genetics and Genomics

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PubMed publication ID

14513364

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19 December 2019

volume

270

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PubMed publication ID

14513364

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19 December 2019

issue

3

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PubMed publication ID

14513364

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14513364%20AND%20SRC:MED&resulttype=core&format=json

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19 December 2019

page(s)

234-242

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PubMed publication ID

14513364

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19 December 2019

cites work

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Molecular characterization of a mutable pigmentation phenotype and isolation of the first active transposable element from Sorghum bicolor

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Somatic variation during long-term subculturing of plant cells caused by insertion of a transposable element in a phenylalanine ammonia-lyase (PAL) gene

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The rice Rim2 transcript accumulates in response to Magnaporthe grisea and its predicted protein product shares similarity with TNP2-like proteins encoded by CACTA transposons

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Terminal-repeat retrotransposons in miniature (TRIM) are involved in restructuring plant genomes

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The transposable element Tam1 from Antirrhinum majus shows structural homology to the maize transposon En/Spm and has no sequence specificity of insertion

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The structure and paramutagenicity of the R-marbled haplotype of Zea mays

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The En/Spm transposable element of maize.

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Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis

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Transposon diversity in Arabidopsis thaliana

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12 December 2020

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New transposable elements identified as insertions in rice transposon Tnr1

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12 December 2020

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A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

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12 December 2020

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Identification of Tnr3, a suppressor-mutator/enhancer-like transposable element from rice

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12 December 2020

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A computer-based systematic survey reveals the predominance of small inverted-repeat elements in wild-type rice genes

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12 December 2020

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Retrotransposons of rice involved in mutations induced by tissue culture

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12 December 2020

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An active DNA transposon family in rice

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12 December 2020

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The complete sequence of 340 kb of DNA around the rice Adh1-adh2 region reveals interrupted colinearity with maize chromosome 4.

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https://pubmed.ncbi.nlm.nih.gov/14513364

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12 December 2020

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A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

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12 December 2020

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Transposable elements: possible catalysts of organismic evolution

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Plant transposable elements: where genetics meets genomics

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Retrotransposons of the Tnt1B family are mobile in Nicotiana plumbaginifolia and can induce alternative splicing of the host gene upon insertion.

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RIRE2, a novel gypsy-type retrotransposon from rice

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

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Transposable elements as sources of variation in animals and plants

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Dasheng: a recently amplified nonautonomous long terminal repeat element that is a major component of pericentromeric regions in rice

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Rice transposable elements: a survey of 73,000 sequence-tagged-connectors

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Activation of tobacco retrotransposons during tissue culture.

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Molecular analysis of the Doppia transposable element of maize

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Basic local alignment search tool

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Psl: a novel Spm-like transposable element from Petunia hybrida

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Survey of transposable elements from rice genomic sequences

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Insertion preference of maize and rice miniature inverted repeat transposable elements as revealed by the analysis of nested elements

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Characterization of transposable elements in the genome of rice (Oryza sativa L.) using Representational Difference Analysis (RDA).

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In vivo characterization of transcriptional regulatory sequences involved in the defence-associated expression of the tobacco retrotransposon Tnt1

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MEGA2: molecular evolutionary genetics analysis software

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Identification and characterization of 14 transposon-like elements in the noncoding regions of members of the Xa21 family of disease resistance genes in rice

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based on heuristic

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Performance evaluation of amino acid substitution matrices

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Plant retrotransposons

1 reference

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reference URL

https://pubmed.ncbi.nlm.nih.gov/14513364

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mobility of the tobacco Tnt1 retrotransposon correlates with its transcriptional activation by fungal factors

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Organization of the Tgm family of transposable elements in soybean

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metaphase and interphase fluorescence in situ hybridization mapping of the rice genome with bacterial artificial chromosomes

1 reference

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https://pubmed.ncbi.nlm.nih.gov/14513364

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The promoter of the tobacco Tnt1 retrotransposon is induced by wounding and by abiotic stress.

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/14513364

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Turned on by stress. Plant retrotransposons

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https://pubmed.ncbi.nlm.nih.gov/14513364

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12 December 2020

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Identifiers

DOI

10.1007/S00438-003-0918-Z

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stated in

Europe PubMed Central

PubMed publication ID

14513364

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14513364%20AND%20SRC:MED&resulttype=core&format=json

retrieved

19 December 2019

PubMed publication ID

14513364

1 reference

stated in

Europe PubMed Central

PubMed publication ID

14513364

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14513364%20AND%20SRC:MED&resulttype=core&format=json

retrieved

19 December 2019

ResearchGate publication ID

9077839

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