Ceramide kinase regulates growth and survival of A549 human lung adenocarcinoma cells (Q42831362)

8 November 2017

title

Ceramide kinase regulates growth and survival of A549 human lung adenocarcinoma cells (English)

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8 November 2017

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7

Sarah Spiegel

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8 November 2017

Poulami Mitra

1

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8 November 2017

Michael Maceyka

2

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8 November 2017

Shawn G Payne

3

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8 November 2017

Nadia Lamour

4

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8 November 2017

Sheldon Milstien

5

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8 November 2017

Charles E Chalfant

6

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8 November 2017

language of work or name

English

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publication date

25 January 2007

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8 November 2017

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8 November 2017

volume

581

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8 November 2017

issue

4

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8 November 2017

page(s)

735-740

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Modifying the beta,gamma leaving-group bridging oxygen alters nucleotide incorporation efficiency, fidelity, and the catalytic mechanism of DNA polymerase beta

8 November 2017

cites work

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Regulation of DNA repair fidelity by molecular checkpoints: "gates" in DNA polymerase beta's substrate selection

30 September 2018

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Modeling electrostatic effects in proteins

30 September 2018

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Simulating the effect of DNA polymerase mutations on transition-state energetics and fidelity: evaluating amino acid group contribution and allosteric coupling for ionized residues in human pol beta

30 September 2018

1 reference

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Magnesium-induced assembly of a complete DNA polymerase catalytic complex.

30 September 2018

1 reference

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Structure and mechanism of DNA polymerase Beta.

30 September 2018

1 reference

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Mechanistic comparison of high-fidelity and error-prone DNA polymerases and ligases involved in DNA repair

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

Use of viscogens, dNTPalphaS, and rhodium(III) as probes in stopped-flow experiments to obtain new evidence for the mechanism of catalysis by DNA polymerase beta.

30 September 2018

1 reference

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Computer simulation of the chemical catalysis of DNA polymerases: discriminating between alternative nucleotide insertion mechanisms for T7 DNA polymerase

30 September 2018

1 reference

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A reexamination of the nucleotide incorporation fidelity of DNA polymerases

30 September 2018

1 reference

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A view at the millennium: the efficiency of enzymatic catalysis

30 September 2018

1 reference

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Loss of DNA polymerase beta stacking interactions with templating purines, but not pyrimidines, alters catalytic efficiency and fidelity.

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

DNA structure and aspartate 276 influence nucleotide binding to human DNA polymerase beta. Implication for the identity of the rate-limiting conformational change

30 September 2018

1 reference

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Q: a molecular dynamics program for free energy calculations and empirical valence bond simulations in biomolecular systems.

30 September 2018

1 reference

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An open and closed case for all polymerases.

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

DNA polymerase beta expression differences in selected human tumors and cell lines

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

Electrostatic origin of the catalytic power of enzymes and the role of preorganized active sites

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

Computer simulations of enzyme catalysis: finding out what has been optimized by evolution.

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

DNA polymerase beta: analysis of the contributions of tyrosine-271 and asparagine-279 to substrate specificity and fidelity of DNA replication by pre-steady-state kinetics

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

DNA polymerase beta: structure-fidelity relationship from Pre-steady-state kinetic analyses of all possible correct and incorrect base pairs for wild type and R283A mutant

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

VMD: visual molecular dynamics

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

dNTP binding to HIV-1 reverse transcriptase and mammalian DNA polymerase beta as revealed by affinity labeling with a photoreactive dNTP analog.

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

Enzyme-DNA interactions required for efficient nucleotide incorporation and discrimination in human DNA polymerase beta.

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

Satisfying hydrogen bonding potential in proteins

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

Polymorphisms in the human DNA polymerase beta gene

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

Comparison between DNA melting thermodynamics and DNA polymerase fidelity

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

Energetics of enzyme catalysis

30 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2001272

Solvation, reorganization energy, and biological catalysis

30 September 2018

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12 December 2020

Free energy simulations of uncatalyzed DNA replication fidelity: structure and stability of T.G and dTTP.G terminal DNA mismatches flanked by a single dangling nucleotide

1 reference

12 December 2020

Decomposition of the solvation free energies of deoxyribonucleoside triphosphates using the free energy perturbation method

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12 December 2020

DNA polymerase beta: contributions of template-positioning and dNTP triphosphate-binding residues to catalysis and fidelity

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12 December 2020

10.1016/J.FEBSLET.2007.01.041

Identifiers

DOI

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8 November 2017

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