Structure and complexity of a bacterial transcriptome. (Q42841193)

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24 January 2020

title

Structure and complexity of a bacterial transcriptome (English)

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24 January 2020

0 references

1

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24 January 2020

David Okou

4

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24 January 2020

5

Michael E Zwick

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24 January 2020

author name string

Anjana Varadarajan

2

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24 January 2020

Brian D Ondov

3

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24 January 2020

Nicholas H Bergman

6

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24 January 2020

language of work or name

English

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publication date

20 March 2009

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24 January 2020

number of pages

9

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based on heuristic

inferred from page(s)

published in

Journal of Bacteriology

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24 January 2020

volume

191

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24 January 2020

issue

10

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24 January 2020

page(s)

3203-3211

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Comparative transcriptional profiling of Bacillus cereus sensu lato strains during growth in CO2-bicarbonate and aerobic atmospheres

24 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

Biochemical features and functional implications of the RNA-based T-box regulatory mechanism

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

Nature, nurture, or chance: stochastic gene expression and its consequences

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

Efficient mapping of Applied Biosystems SOLiD sequence data to a reference genome for functional genomic applications

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

The transcriptional landscape of the yeast genome defined by RNA sequencing

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

SOAP: short oligonucleotide alignment program

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.

27 May 2018

1 reference

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High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

Transcriptional profiling of the Bacillus anthracis life cycle in vitro and an implied model for regulation of spore formation

27 May 2018

1 reference

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Rfam: annotating non-coding RNAs in complete genomes

27 May 2018

1 reference

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Order and disorder in bacterial genomes

27 May 2018

1 reference

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Global Effects of Virulence Gene Regulators in a Bacillus anthracis Strain with Both Virulence Plasmids

27 May 2018

1 reference

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Amplification of cDNA ends using PCR suppression effect and step-out PCR.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

Bacillus anthracis virulence in Guinea pigs vaccinated with anthrax vaccine adsorbed is linked to plasmid quantities and clonality

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

Stochastic gene expression in a single cell

27 May 2018

1 reference

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Regulation of noise in the expression of a single gene

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

The GA motif: an RNA element common to bacterial antitermination systems, rRNA, and eukaryotic RNAs

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

The anthrax toxin activator gene atxA is associated with CO2-enhanced non-toxin gene expression in Bacillus anthracis

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

Regulation of the Bacillus anthracis protective antigen gene: CO2 and a trans-acting element activate transcription from one of two promoters

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2687165

Number and distribution of polyadenylated RNA sequences in yeast

27 May 2018

1 reference

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27 May 2018

Identifiers

DOI

10.1128/JB.00122-09

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19304856%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

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24 January 2020

PubMed publication ID

19304856

1 reference