The RNA polymerase II kinase Ctk1 regulates positioning of a 5' histone methylation boundary along genes. (Q42951897)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17088384%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

title

The RNA polymerase II kinase Ctk1 regulates positioning of a 5' histone methylation boundary along genes (English)

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21 December 2019

10

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21 December 2019

R Nicholas Laribee

4

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21 December 2019

8

Nevan J Krogan

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21 December 2019

7

Jack F Greenblatt

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21 December 2019

author name string

Tiaojiang Xiao

1

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21 December 2019

Yoichiro Shibata

2

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21 December 2019

Bhargavi Rao

3

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21 December 2019

Rose O'Rourke

5

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21 December 2019

Michael J Buck

6

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21 December 2019

Jason D Lieb

9

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21 December 2019

language of work or name

English

0 references

publication date

6 November 2006

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Molecular and Cellular Biology

21 December 2019

published in

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21 December 2019

volume

27

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21 December 2019

issue

2

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21 December 2019

page(s)

721-731

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Ctk complex-mediated regulation of histone methylation by COMPASS.

21 December 2019

cites work

1 reference

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Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression

26 May 2018

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Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF

26 May 2018

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A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling

26 May 2018

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ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression

26 May 2018

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The BUR1 cyclin-dependent protein kinase is required for the normal pattern of histone methylation by SET2.

26 May 2018

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26 May 2018

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Histone H4-K16 acetylation controls chromatin structure and protein interactions

26 May 2018

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26 May 2018

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Double chromodomains cooperate to recognize the methylated histone H3 tail

26 May 2018

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Eaf3 chromodomain interaction with methylated H3-K36 links histone deacetylation to Pol II elongation

26 May 2018

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Histone demethylation by a family of JmjC domain-containing proteins

26 May 2018

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Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex

26 May 2018

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Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription

26 May 2018

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Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile

26 May 2018

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Human but not yeast CHD1 binds directly and selectively to histone H3 methylated at lysine 4 via its tandem chromodomains

26 May 2018

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The diverse functions of histone lysine methylation

26 May 2018

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Genome-wide map of nucleosome acetylation and methylation in yeast

26 May 2018

1 reference

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Single-nucleosome mapping of histone modifications in S. cerevisiae

26 May 2018

1 reference

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BUR kinase selectively regulates H3 K4 trimethylation and H2B ubiquitylation through recruitment of the PAF elongation complex

26 May 2018

1 reference

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WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development

26 May 2018

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Altered nucleosome occupancy and histone H3K4 methylation in response to 'transcriptional stress'.

26 May 2018

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A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 K36 methylation with transcript elongation

26 May 2018

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Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo

26 May 2018

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Histone variants: deviants?

26 May 2018

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Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation

26 May 2018

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Histone H2B ubiquitylation is associated with elongating RNA polymerase II

26 May 2018

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Histone demethylation mediated by the nuclear amine oxidase homolog LSD1

26 May 2018

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Regulated nucleosome mobility and the histone code.

26 May 2018

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Role of protein methylation in regulation of transcription

26 May 2018

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Human PAD4 regulates histone arginine methylation levels via demethylimination

26 May 2018

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Histone deimination antagonizes arginine methylation

26 May 2018

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Histones and histone modifications

26 May 2018

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Histone variants, nucleosome assembly and epigenetic inheritance

26 May 2018

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Phosphorylation of serine 2 within the RNA polymerase II C-terminal domain couples transcription and 3' end processing

26 May 2018

1 reference

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Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II

26 May 2018

1 reference

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Tails of intrigue: phosphorylation of RNA polymerase II mediates histone methylation

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

Budding yeast CTDK-I is required for DNA damage-induced transcription

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

Phosphorylation of RNA polymerase II CTD regulates H3 methylation in yeast

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

Active genes are tri-methylated at K4 of histone H3

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

Histone modifications in transcriptional regulation

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

Opposing effects of Ctk1 kinase and Fcp1 phosphatase at Ser 2 of the RNA polymerase II C-terminal domain

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

Systematic genetic analysis with ordered arrays of yeast deletion mutants

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

Translating the Histone Code

26 May 2018

1 reference

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Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

26 May 2018

1 reference

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The language of covalent histone modifications

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

In vivo cross-linking and immunoprecipitation for studying dynamic Protein:DNA associations in a chromatin environment

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

The yeast carboxyl-terminal repeat domain kinase CTDK-I is a divergent cyclin-cyclin-dependent kinase complex

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

CTD kinase large subunit is encoded by CTK1, a gene required for normal growth of Saccharomyces cerevisiae

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

A method for the rapid sequence-independent amplification of microdissected chromosomal material

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

Histone H3 lysine 4 mono-methylation does not require ubiquitination of histone H2B.

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

Methylation of histone H3 K4 mediates association of the Isw1p ATPase with chromatin

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800795

16 August 2018

Identifiers

DOI

10.1128/MCB.01628-06

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17088384%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17088384%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

PubMed publication ID

17088384

1 reference