Origin and evolution of the nuclear auxin response system. (Q55091121)

http://europepmc.org/abstract/PMC/5873896

19 June 2018

title

Origin and evolution of the nuclear auxin response system. (English)

1 reference

http://europepmc.org/abstract/PMC/5873896

19 June 2018

author

Dolf Weijers

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29580381%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Sumanth K Mutte

1

1 reference

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8 June 2020

Hirotaka Kato

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29580381%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Carl J. Rothfels

3

1 reference

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8 June 2020

Gane Ka-Shu Wong

5

1 reference

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8 June 2020

4

Michael Melkonian

1 reference

8 June 2020

language of work or name

English

0 references

publication date

27 March 2018

1 reference

http://europepmc.org/abstract/PMC/5873896

19 June 2018

published in

eLife

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29580381%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

volume

7

1 reference

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describes a project that uses

8 June 2020

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

object named as

DEseq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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19 June 2018

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Auxin-Mediated Transcriptional System with a Minimal Set of Components Is Critical for Morphogenesis through the Life Cycle in Marchantia polymorpha

19 June 2018

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19 June 2018

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Interaction and signalling between a cosmopolitan phytoplankton and associated bacteria.

19 June 2018

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19 June 2018

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19 June 2018

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19 June 2018

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Protein-protein interaction and gene co-expression maps of ARFs and Aux/IAAs in Arabidopsis

19 June 2018

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

19 June 2018

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19 June 2018

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Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation

19 June 2018

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RAV genes: regulation of floral induction and beyond

19 June 2018

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Structural basis for oligomerization of auxin transcriptional regulators

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Molecular basis for AUXIN RESPONSE FACTOR protein interaction and the control of auxin response repression

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Structural basis for DNA binding specificity by the auxin-dependent ARF transcription factors

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

19 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

CRISPR/Cas9-mediated targeted mutagenesis in the liverwort Marchantia polymorpha L.

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

19 June 2018

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Evolution of the ARF gene family in land plants: old domains, new tricks.

19 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

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19 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Ancestral polyploidy in seed plants and angiosperms

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Dynamics of auxin-dependent Ca2+ and pH signaling in root growth revealed by integrating high-resolution imaging with automated computer vision-based analysis

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

ABP1 mediates auxin inhibition of clathrin-dependent endocytosis in Arabidopsis

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Auxin regulates distal stem cell differentiation in Arabidopsis roots

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

The role of floral organs in carpels, an Arabidopsis loss-of-function mutation in MicroRNA160a, in organogenesis and the mechanism regulating its expression

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Genome-wide analysis of the auxin-responsive transcriptome downstream of iaa1 and its expression analysis reveal the diversity and complexity of auxin-regulated gene expression

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

COI1 is a critical component of a receptor for jasmonate and the bacterial virulence factor coronatine

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Mechanism of auxin perception by the TIR1 ubiquitin ligase

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

The Arabidopsis F-box protein TIR1 is an auxin receptor

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

The F-box protein TIR1 is an auxin receptor

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Auxin: regulation, action, and interaction.

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

A molecular timeline for the origin of photosynthetic eukaryotes

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Auxin regulates SCF(TIR1)-dependent degradation of AUX/IAA proteins

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Activation and repression of transcription by auxin-response factors

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Protein-protein interactions among the Aux/IAA proteins

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Early genes and auxin action

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

The Roles of the Sole Activator-Type Auxin Response Factor in Pattern Formation of Marchantia polymorpha.

19 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Auxin signaling through SCFTIR1/AFBs mediates feedback regulation of IAA biosynthesis.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Auxin Produced by the Indole-3-Pyruvic Acid Pathway Regulates Development and Gemmae Dormancy in the Liverwort Marchantia polymorpha.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

AUXIN RESPONSE FACTOR17 is essential for pollen wall pattern formation in Arabidopsis.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

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13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Visualization of auxin-mediated transcriptional activation using a common auxin-responsive reporter system in the liverwort Marchantia polymorpha.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Physcomitrella patens auxin-resistant mutants affect conserved elements of an auxin-signaling pathway

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Comprehensive transcriptome analysis of auxin responses in Arabidopsis

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Transcript profiling reveals diverse roles of auxin-responsive genes during reproductive development and abiotic stress in rice.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

The HAT2 gene, a member of the HD-Zip gene family, isolated as an auxin inducible gene by DNA microarray screening, affects auxin response in Arabidopsis

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Auxin inhibits endocytosis and promotes its own efflux from cells

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5873896

Control of root cap formation by MicroRNA-targeted auxin response factors in Arabidopsis

30 November 2018

1 reference

12 December 2020

Effect of Indole-3-acetic Acid on Membrane Potentials of Oat Coleoptile Cells

1 reference

12 December 2020

TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis

1 reference

12 December 2020

Rapid auxin-induced cell expansion and gene expression: a four-decade-old question revisited

1 reference

12 December 2020

Culturing the moss Physcomitrella patens

1 reference

12 December 2020

Rapid response of the plasma-membrane potential in oat coleoptiles to auxin and other weak acids

1 reference

12 December 2020

Identifiers

DOI

10.7554/ELIFE.33399

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29580381%20AND%20SRC:MED&resulttype=core&format=json

release_ec5m5sc5ljahlpu5kbhbobw5ua

8 June 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ec5m5sc5ljahlpu5kbhbobw5ua

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29580381%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

PubMed publication ID

29580381

1 reference