Next-generation genetic code expansion (Q56889444)

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scientific article published on 30 July 2018

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English	Next-generation genetic code expansion	scientific article published on 30 July 2018

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Europe PubMed Central

PMC publication ID

6748649

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15 April 2020

title

Next-generation genetic code expansion (English)

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PMC publication ID

6748649

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15 April 2020

author name string

Pol Arranz-Gibert

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1

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6748649

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15 April 2020

Koen Vanderschuren

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2

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PMC publication ID

6748649

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30072242%20AND%20SRC:MED&resulttype=core&format=json

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15 April 2020

Farren J Isaacs

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3

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6748649

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30072242%20AND%20SRC:MED&resulttype=core&format=json

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15 April 2020

language of work or name

English

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publication date

30 July 2018

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Europe PubMed Central

PMC publication ID

6748649

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30072242%20AND%20SRC:MED&resulttype=core&format=json

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15 April 2020

published in

Current Opinion in Chemical Biology

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Europe PubMed Central

PMC publication ID

6748649

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30072242%20AND%20SRC:MED&resulttype=core&format=json

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15 April 2020

volume

46

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Europe PubMed Central

PMC publication ID

6748649

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30072242%20AND%20SRC:MED&resulttype=core&format=json

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15 April 2020

page(s)

203-211

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Europe PubMed Central

PMC publication ID

6748649

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15 April 2020

cites work

Specialized ribosome system: preferential translation of a single mRNA species by a subpopulation of mutated ribosomes in Escherichia coli

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Frameshift Suppression: a Nucleotide Addition in the Anticodon of a Glycine Transfer RNA

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Major anticodon-binding region missing from an archaebacterial tRNA synthetase

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Cell-free translation reconstituted with purified components

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https://pubmed.ncbi.nlm.nih.gov/30072242

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Uniform binding of aminoacyl-tRNAs to elongation factor Tu by thermodynamic compensation

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12 December 2020

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Structural basis for orthogonal tRNA specificities of tyrosyl-tRNA synthetases for genetic code expansion

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An expanded genetic code with a functional quadruplet codon

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Designer ribozymes: programming the tRNA specificity into flexizyme

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Crystal Structures of the Ribosome in Complex with Release Factors RF1 and RF2 Bound to a Cognate Stop Codon

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12 December 2020

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A network of orthogonal ribosome x mRNA pairs.

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An unnatural hydrophobic base pair system: site-specific incorporation of nucleotide analogs into DNA and RNA

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

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Elongation factor Tu mutants expand amino acid tolerance of protein biosynthesis system

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12 December 2020

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Exploration of incorporation of Nalpha-methylated amino acids into peptides by sense-suppression method

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Ribosomal synthesis of N-methyl peptides

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12 December 2020

based on heuristic

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Initiating translation with D-amino acids

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

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Structural basis of specific tRNA aminoacylation by a small in vitro selected ribozyme

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Ribosomal synthesis of polypeptoids and peptoid-peptide hybrids

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An unnatural base pair system for efficient PCR amplification and functionalization of DNA molecules

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Pyrrolysyl-tRNA synthetase-tRNA(Pyl) structure reveals the molecular basis of orthogonality

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Programming cells by multiplex genome engineering and accelerated evolution

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Discovery of Escherichia coli methionyl-tRNA synthetase mutants for efficient labeling of proteins with azidonorleucine in vivo

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https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

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Expanded genetic alphabets in the polymerase chain reaction

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Site-specific incorporation of p-propargyloxyphenylalanine in a cell-free environment for direct protein-protein click conjugation

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Encoding multiple unnatural amino acids via evolution of a quadruplet-decoding ribosome

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional replacement of the endogenous tyrosyl-tRNA synthetase-tRNATyr pair by the archaeal tyrosine pair in Escherichia coli for genetic code expansion

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Adding new chemistries to the genetic code

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Residue-specific incorporation of non-canonical amino acids into proteins: recent developments and applications

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Precise manipulation of chromosomes in vivo enables genome-wide codon replacement

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Amplification, mutation, and sequencing of a six-letter synthetic genetic system

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expanding the genetic code of Escherichia coli with phosphoserine

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Highly specific unnatural base pair systems as a third base pair for PCR amplification

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

N-acetyl lysyl-tRNA synthetases evolved by a CcdB-based selection possess N-acetyl lysine specificity in vitro and in vivo

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Designer proteins: applications of genetic code expansion in cell biology

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reevaluation of the D-amino acid compatibility with the elongation event in translation

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Upgrading protein synthesis for synthetic biology.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genomically recoded organisms expand biological functions

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

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inferred from PubMed ID database lookup

Probing the limits of genetic recoding in essential genes.

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

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Natural-like replication of an unnatural base pair for the expansion of the genetic alphabet and biotechnology applications

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A semi-synthetic organism with an expanded genetic alphabet

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Engineering the elongation factor Tu for efficient selenoprotein synthesis.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Systematic exploration of a class of hydrophobic unnatural base pairs yields multiple new candidates for the expansion of the genetic alphabet

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Precise manipulation of bacterial chromosomes by conjugative assembly genome engineering

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recoded organisms engineered to depend on synthetic amino acids.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

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Biocontainment of genetically modified organisms by synthetic protein design

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-throughput preparation methods of crude extract for robust cell-free protein synthesis

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Semisynthetic tRNA complement mediates in vitro protein synthesis

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Outwitting EF-Tu and the ribosome: translation with d-amino acids

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Efficient genetic encoding of phosphoserine and its nonhydrolyzable analog

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein synthesis by ribosomes with tethered subunits.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosome Subunit Stapling for Orthogonal Translation in E. coli.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolution of translation machinery in recoded bacteria enables multi-site incorporation of nonstandard amino acids.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosomal Synthesis of Peptides with Multiple β-Amino Acids.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High Fidelity, Efficiency and Functionalization of Ds-Px Unnatural Base Pairs in PCR Amplification for a Genetic Alphabet Expansion System.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In Vivo Biosynthesis of a β-Amino Acid-Containing Protein

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genomic Recoding Broadly Obstructs the Propagation of Horizontally Transferred Genetic Elements

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

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Design, synthesis, and testing toward a 57-codon genome.

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30072242

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12 December 2020

based on heuristic

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Emergent rules for codon choice elucidated by editing rare arginine codons in Escherichia coli

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A semisynthetic organism engineered for the stable expansion of the genetic alphabet.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chemical Stabilization of Unnatural Nucleotide Triphosphates for the in Vivo Expansion of the Genetic Alphabet

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An orthogonalized platform for genetic code expansion in both bacteria and eukaryotes.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Design of a synthetic yeast genome.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Large-scale recoding of a bacterial genome by iterative recombineering of synthetic DNA.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Continuous directed evolution of aminoacyl-tRNA synthetases

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A semi-synthetic organism that stores and retrieves increased genetic information.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A Tool for the Import of Natural and Unnatural Nucleoside Triphosphates into Bacteria.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30072242

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1016/J.CBPA.2018.07.020

1 reference

stated in

Europe PubMed Central

PMC publication ID

6748649

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30072242%20AND%20SRC:MED&resulttype=core&format=json

retrieved

15 April 2020

PMC publication ID

6748649

1 reference

stated in

Europe PubMed Central

PMC publication ID

6748649

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30072242%20AND%20SRC:MED&resulttype=core&format=json

retrieved

15 April 2020

PubMed publication ID

30072242

1 reference

stated in

Europe PubMed Central

PMC publication ID

6748649

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30072242%20AND%20SRC:MED&resulttype=core&format=json

retrieved

15 April 2020

 

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