Accurate prediction of protein torsion angles using chemical shifts and sequence homology (Q57014412)

article by Stephen Neal et al published 2006 in Magnetic Resonance in Chemistry

Language	Label	Description	Also known as
English	Accurate prediction of protein torsion angles using chemical shifts and sequence homology	article by Stephen Neal et al published 2006 in Magnetic Resonance in Chemistry

Statements

instance of

scholarly article

0 references

title

Accurate prediction of protein torsion angles using chemical shifts and sequence homology (English)

0 references

0 references

David S. Wishart

4

0 references

author name string

Stephen Neal

series ordinal

1

0 references

Mark Berjanskii

series ordinal

2

0 references

Haiyan Zhang

series ordinal

3

0 references

publication date

2006

0 references

published in

Magnetic Resonance in Chemistry

0 references

volume

44

0 references

issue

S1

0 references

page(s)

S158-S167

0 references

cites work

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

1 reference

20 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1107/S0907444998003254

Solution Structure of MTH0776 from Methanobacterium Thermoautotrophicum

2 references

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1007/S10858-005-1275-5

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Peptide bonds revisited

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

A graph-theory algorithm for rapid protein side-chain prediction

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

RefDB: a database of uniformly referenced protein chemical shifts

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1023/A:1022836027055

Effective energy function for proteins in solution

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Automated 1H and 13C chemical shift prediction using the BioMagResBank

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Chemical shifts and three-dimensional protein structures

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Automatic parameterization of force field by systematic search and genetic algorithms

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

A simple method to adjust inconsistently referenced 13C and 15N chemical shift assignments of proteins

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1007/S10858-004-7441-3

Analysis of proton chemical shifts in regular secondary structure of proteins

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Direct measurement of angles between bond vectors in high-resolution NMR.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

1H, 13C and 15N random coil NMR chemical shifts of the common amino acids. I. Investigations of nearest-neighbor effects

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1007/BF00227471

A simple method to predict protein flexibility using secondary chemical shifts

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1021/JA054842F

The chemical shift index: a fast and simple method for the assignment of protein secondary structure through NMR spectroscopy

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Asparagine and glutamine side-chain conformation in solution and crystal: a comparison for hen egg-white lysozyme using residual dipolar couplings

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Targeting novel folds for structural genomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Torsion angle dynamics for NMR structure calculation with the new program DYANA

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Effect of disulfide bridge formation on the NMR spectrum of a protein: studies on oxidized and reduced Escherichia coli thioredoxin.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Chemical shifts as a tool for structure determination

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1016/S0076-6879(94)39014-2

SEQSEE: a comprehensive program suite for protein sequence analysis

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1093/BIOINFORMATICS/10.2.121

Comparative modeling of CASP3 targets using PSI-BLAST and SCWRL

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Probing multiple effects on 15N, 13C alpha, 13C beta, and 13C' chemical shifts in peptides using density functional theory

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Protein chemical shift analysis: a practical guide

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

A software tool for the prediction of Xaa-Pro peptide bond conformations in proteins based on 13C chemical shift statistics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Comparative modeling of CASP3 targets using PSI-BLAST and SCWRL.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Determination of three-bond scalar coupling between 13C' and 1H(alpha) in proteins using an iHN(CA),CO(alpha/beta-J-COHA) experiment.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Automated NMR determination of protein backbone dihedral angles from cross-correlated spin relaxation

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

PROSHIFT: Protein chemical shift prediction using artificial neural networks

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Protein backbone angle prediction with machine learning approaches.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

VADAR: a web server for quantitative evaluation of protein structure quality

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1093/NAR/GKG565

Protein phi and psi dihedral restraints determined from multidimensional hypersurface correlations of backbone chemical shifts and their use in the determination of protein tertiary structures

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Structural Proteomics: Toward High-Throughput Structural Biology as a Tool in Functional Genomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

A relational database for sequence-specific protein NMR data

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Statistically significant dependence of the Xaa-Pro peptide bond conformation on secondary structure and amino acid sequence

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Determination of backbone angle psi in proteins using a TROSY-based alpha/beta-HN(CO)CA-J experiment.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Rapid and accurate calculation of protein 1H, 13C and 15N chemical shifts

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1023/A:1023812930288

Measurement of homo- and heteronuclear J couplings from quantitative J correlation.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Chi1 torsion angle dynamics in proteins from dipolar couplings

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Self-consistent Karplus parametrization of 3J couplings depending on the polypeptide side-chain torsion chi1.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Fold prediction of helical proteins using torsion angle dynamics and predicted restraints

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Protein backbone angle restraints from searching a database for chemical shift and sequence homology

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Vicinal coupling constants and protein dynamics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1002/MRC.1832

Identifiers

DOI

10.1002/MRC.1832

0 references

PubMed publication ID

16823900

0 references

Accurate prediction of protein torsion angles using chemical shifts and sequence homology (Q57014412)

Statements

Identifiers

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Navigation menu

Accurate prediction of protein torsion angles using chemical shifts and sequence homology (Q57014412)

Statements

Identifiers

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Navigation menu

Search