RosettaLigand docking with full ligand and receptor flexibility. (Q51861937)

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scientific article published on 18 November 2008

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Language	Label	Description	Also known as
English	RosettaLigand docking with full ligand and receptor flexibility.	scientific article published on 18 November 2008

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instance of

scholarly article

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stated in

Europe PubMed Central

PubMed publication ID

19041878

retrieved

14 April 2018

reference URL

http://europepmc.org/abstract/MED/19041878

title

RosettaLigand docking with full ligand and receptor flexibility. (English)

1 reference

stated in

Europe PubMed Central

PubMed publication ID

19041878

retrieved

14 April 2018

reference URL

http://europepmc.org/abstract/MED/19041878

author

David Baker

series ordinal

2

1 reference

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Europe PubMed Central

PubMed publication ID

19041878

retrieved

14 April 2018

reference URL

http://europepmc.org/abstract/MED/19041878

author name string

Ian W Davis

series ordinal

1

1 reference

stated in

Europe PubMed Central

PubMed publication ID

19041878

retrieved

14 April 2018

reference URL

http://europepmc.org/abstract/MED/19041878

language of work or name

English

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publication date

18 November 2008

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Europe PubMed Central

PubMed publication ID

19041878

retrieved

14 April 2018

reference URL

http://europepmc.org/abstract/MED/19041878

published in

Journal of Molecular Biology

1 reference

stated in

Europe PubMed Central

PubMed publication ID

19041878

retrieved

14 April 2018

reference URL

http://europepmc.org/abstract/MED/19041878

volume

385

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stated in

Europe PubMed Central

PubMed publication ID

19041878

retrieved

14 April 2018

reference URL

http://europepmc.org/abstract/MED/19041878

issue

2

1 reference

stated in

Europe PubMed Central

PubMed publication ID

19041878

retrieved

14 April 2018

reference URL

http://europepmc.org/abstract/MED/19041878

page(s)

381-392

1 reference

stated in

Europe PubMed Central

PubMed publication ID

19041878

retrieved

14 April 2018

reference URL

http://europepmc.org/abstract/MED/19041878

cites work

Design of a Novel Globular Protein Fold with Atomic-Level Accuracy

2 references

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/citations/10.1126/SCIENCE.1089427

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

De novo computational design of retro-aldol enzymes

2 references

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/citations/10.1126/SCIENCE.1152692

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Improved side-chain modeling for protein-protein docking

2 references

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/citations/10.1110/PS.041222905

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Kemp elimination catalysts by computational enzyme design

2 references

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/citations/10.1038/NATURE06879

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Native protein sequences are close to optimal for their structures

2 references

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/citations/10.1073/PNAS.97.19.10383

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Protein-protein docking with backbone flexibility.

2 references

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/citations/10.1016/J.JMB.2007.07.050

Novel procedure for modeling ligand/receptor induced fit effects.

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Rescoring Docking Hit Lists for Model Cavity Sites: Predictions and Experimental Testing

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Prediction of protein-ligand interactions. Docking and scoring: successes and gaps

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Close agreement between the orientation dependence of hydrogen bonds observed in protein structures and quantum mechanical calculations

2 references

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/citations/10.1073/PNAS.0307578101

Target flexibility: an emerging consideration in drug discovery and design

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Automated docking to multiple target structures: incorporation of protein mobility and structural water heterogeneity in AutoDock

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

FlexE: efficient molecular docking considering protein structure variations.

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Macromolecular modeling with rosetta

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

FLIPDock: docking flexible ligands into flexible receptors.

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Effective energy functions for protein structure prediction.

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Toward high-resolution de novo structure prediction for small proteins.

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

ROSETTALIGAND: protein-small molecule docking with full side-chain flexibility.

2 references

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/citations/10.1002/PROT.21086

Bayesian statistical analysis of protein side-chain rotamer preferences

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Protein-ligand docking: current status and future challenges

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Diverse, high-quality test set for the validation of protein-ligand docking performance.

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

An orientation-dependent hydrogen bonding potential improves prediction of specificity and structure for proteins and protein-protein complexes

2 references

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/citations/10.1016/S0022-2836(03)00021-4

Flexible ligand docking to multiple receptor conformations: a practical alternative

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations

2 references

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/citations/10.1016/S0022-2836(03)00670-3

A critical assessment of docking programs and scoring functions

1 reference

stated in

COCI

retrieved

9 October 2024

reference URL

https://opencitations.net/index/api/v1/references/10.1016/J.JMB.2008.11.010

Identifiers

DOI

10.1016/J.JMB.2008.11.010

1 reference

stated in

Europe PubMed Central

PubMed publication ID

19041878

retrieved

14 April 2018

reference URL

http://europepmc.org/abstract/MED/19041878

PubMed publication ID

19041878

1 reference

stated in

Europe PubMed Central

PubMed publication ID

19041878

retrieved

14 April 2018

reference URL

http://europepmc.org/abstract/MED/19041878

ResearchGate publication ID

23554839

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