Identification, phylogeny, and transcript profiling of ERF family genes during development and abiotic stress treatments in tomato (Q51898493)

17 April 2018

title

Identification, phylogeny, and transcript profiling of ERF family genes during development and abiotic stress treatments in tomato (English)

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https://api.crossref.org/works/10.1007/S00438-010-0580-1

27 July 2024

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27 July 2024

multigene family

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27 July 2024

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2

Rahul Kumar

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27 July 2024

5

Akhilesh K. Tyagi

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27 July 2024

author name string

Rita Sharma

4

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17 April 2018

Manoj K. Sharma

1

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27 July 2024

Amolkumar U. Solanke

3

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27 July 2024

Arun K. Sharma

6

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27 July 2024

language of work or name

English

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National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=20922546

27 July 2024

publication date

5 October 2010

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17 April 2018

full work available at URL

http://link.springer.com/content/pdf/10.1007/s00438-010-0580-1.pdf

file format

Portable Document Format

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https://api.crossref.org/works/10.1007/S00438-010-0580-1

http://link.springer.com/article/10.1007/s00438-010-0580-1/fulltext.html

27 July 2024

1 reference

https://api.crossref.org/works/10.1007/S00438-010-0580-1

http://link.springer.com/content/pdf/10.1007/s00438-010-0580-1

27 July 2024

1 reference

https://api.crossref.org/works/10.1007/S00438-010-0580-1

Molecular Genetics and Genomics

27 July 2024

published in

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17 April 2018

volume

284

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17 April 2018

issue

6

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17 April 2018

page(s)

455-475

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17 April 2018

DNA binding by the Arabidopsis CBF1 transcription factor requires the PKKP/RAGRxKFxETRHP signature sequence

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Pti4 is induced by ethylene and salicylic acid, and its product is phosphorylated by the Pto kinase

21 January 2018

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Molecular cloning and functional analysis of an ERF gene from cotton (Gossypium hirsutum).

21 January 2018

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Functional and phylogenetic analysis of a DREB/CBF-like gene in perennial ryegrass (Lolium perenne L.).

21 January 2018

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12 December 2020

A comparison of profile hidden Markov model procedures for remote homology detection

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12 December 2020

New members of the tomato ERF family show specific expression pattern and diverse DNA-binding capacity to the GCC box element.

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12 December 2020

AtERF38 (At2g35700), an AP2/ERF family transcription factor gene from Arabidopsis thaliana, is expressed in specific cell types of roots, stems and seeds that undergo suberization.

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12 December 2020

Analysis of Arabidopsis glucose insensitive mutants, gin5 and gin6, reveals a central role of the plant hormone ABA in the regulation of plant vegetative development by sugar.

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12 December 2020

[Classification of the arabidopsis ERF gene family based on Bayesian analysis]

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12 December 2020

AtERF14, a member of the ERF family of transcription factors, plays a nonredundant role in plant defense

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12 December 2020

Expression of the ethylene response factor gene TSRF1 enhances abscisic acid responses during seedling development in tobacco

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12 December 2020

Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor

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12 December 2020

GmEREBP1 is a transcription factor activating defense genes in soybean and Arabidopsis

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12 December 2020

Utilization of tomato microarrays for comparative gene expression analysis in the Solanaceae

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12 December 2020

Heterologous expression of two Medicago truncatula putative ERF transcription factor genes, WXP1 and WXP2, in Arabidopsis led to increased leaf wax accumulation and improved drought tolerance, but differential response in freezing tolerance

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12 December 2020

Molecular changes associated with the setting up of secondary growth in aspen.

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12 December 2020

The neighbor-joining method: a new method for reconstructing phylogenetic trees

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12 December 2020

WIN1, a transcriptional activator of epidermal wax accumulation in Arabidopsis

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12 December 2020

Overexpression of the tobacco Tsi1 gene encoding an EREBP/AP2-type transcription factor enhances resistance against pathogen attack and osmotic stress in tobacco

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12 December 2020

The SHINE clade of AP2 domain transcription factors activates wax biosynthesis, alters cuticle properties, and confers drought tolerance when overexpressed in Arabidopsis

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12 December 2020

Cross talk between signaling pathways in pathogen defense

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12 December 2020

SMART 6: recent updates and new developments

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12 December 2020

Ripening of fleshy fruit: molecular insight and the role of ethylene

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12 December 2020

Negative regulation of defence and stress genes by EAR-motif-containing repressors

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12 December 2020

Tomato TERF1 modulates ethylene response and enhances osmotic stress tolerance by activating expression of downstream genes

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12 December 2020

Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant.

1 reference

12 December 2020

Overexpression of OsERF1, a novel rice ERF gene, up-regulates ethylene-responsive genes expression besides affects growth and development in Arabidopsis.

1 reference

12 December 2020

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

1 reference

12 December 2020

Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice

1 reference

12 December 2020

ABR1, an APETALA2-domain transcription factor that functions as a repressor of ABA response in Arabidopsis

1 reference

12 December 2020

Differential gene expression in response to mechanical wounding and insect feeding in Arabidopsis.

1 reference

12 December 2020

Over-expression of the Arabidopsis DRE/CRT-binding transcription factor DREB2C enhances thermotolerance

1 reference

12 December 2020

Overexpression of NtERF5, a new member of the tobacco ethylene response transcription factor family enhances resistance to tobacco mosaic virus

1 reference

12 December 2020

DNA-binding specificity of the ERF/AP2 domain of Arabidopsis DREBs, transcription factors involved in dehydration- and cold-inducible gene expression

1 reference

12 December 2020

Crosstalk between abiotic and biotic stress responses: a current view from the points of convergence in the stress signaling networks

1 reference

12 December 2020

A RAV-like transcription factor controls photosynthesis and senescence in soybean

1 reference

12 December 2020

Constitutive expression of ETHYLENE-RESPONSE-FACTOR1 in Arabidopsis confers resistance to several necrotrophic fungi.

1 reference

12 December 2020

ERF protein JERF1 that transcriptionally modulates the expression of abscisic acid biosynthesis-related gene enhances the tolerance under salinity and cold in tobacco

1 reference

12 December 2020

MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress

1 reference

12 December 2020

SMART, a simple modular architecture research tool: identification of signaling domains

1 reference

12 December 2020

RARTF: database and tools for complete sets of Arabidopsis transcription factors

1 reference

12 December 2020

DEAR1, a transcriptional repressor of DREB protein that mediates plant defense and freezing stress responses in Arabidopsis.

1 reference

12 December 2020

Molecular characterization of seven genes encoding ethylene-responsive transcriptional factors during plum fruit development and ripening.

1 reference

12 December 2020

The AP2/EREBP family of plant transcription factors

1 reference

12 December 2020

SodERF3, a novel sugarcane ethylene responsive factor (ERF), enhances salt and drought tolerance when overexpressed in tobacco plants

1 reference

12 December 2020

A role for the GCC-box in jasmonate-mediated activation of the PDF1.2 gene of Arabidopsis

1 reference

12 December 2020

Molecular cloning, expression profiling and trans-activation property studies of a DREB2-like gene from chrysanthemum (Dendranthema vestitum).

1 reference

12 December 2020

Ethylene-inducible DNA binding proteins that interact with an ethylene-responsive element

1 reference

12 December 2020

From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants

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12 December 2020

Overexpression of Arabidopsis ESR1 induces initiation of shoot regeneration

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12 December 2020

Tobacco to tomatoes: a phylogenetic perspective on fruit diversity in the Solanaceae

1 reference

12 December 2020

Membrane-tethered transcription factors in Arabidopsis thaliana: novel regulators in stress response and development

1 reference

12 December 2020

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

1 reference

12 December 2020

GmDREB2, a soybean DRE-binding transcription factor, conferred drought and high-salt tolerance in transgenic plants

1 reference

12 December 2020

DATF: a database of Arabidopsis transcription factors

1 reference

12 December 2020

The AP2/ERF domain transcription factor ORA59 integrates jasmonic acid and ethylene signals in plant defense.

1 reference

12 December 2020

The transcription factor MtSERF1 of the ERF subfamily identified by transcriptional profiling is required for somatic embryogenesis induced by auxin plus cytokinin in Medicago truncatula.

1 reference

12 December 2020

Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit

1 reference

12 December 2020

FRIZZY PANICLE is required to prevent the formation of axillary meristems and to establish floral meristem identity in rice spikelets

1 reference

12 December 2020

Signal transduction systems regulating fruit ripening.

1 reference

12 December 2020

The Pto kinase conferring resistance to tomato bacterial speck disease interacts with proteins that bind a cis-element of pathogenesis-related genes

1 reference

12 December 2020

Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1

1 reference

12 December 2020

Arabidopsis genome sequence as a tool for functional genomics in tomato

1 reference

12 December 2020

Transcription factors in plant defense and stress responses

1 reference

12 December 2020

A novel ERF transcription activator in wheat and its induction kinetics after pathogen and hormone treatments

1 reference

12 December 2020

Arabidopsis ERF4 is a transcriptional repressor capable of modulating ethylene and abscisic acid responses

1 reference

12 December 2020

The ethylene-responsive factor like protein 1 (CaERFLP1) of hot pepper (Capsicum annuum L.) interacts in vitro with both GCC and DRE/CRT sequences with different binding affinities: possible biological roles of CaERFLP1 in response to pathogen infec

1 reference

12 December 2020

Identification of suitable internal control genes for expression studies in Coffea arabica under different experimental conditions

1 reference

12 December 2020

Phylogeny, gene structures, and expression patterns of the ERF gene family in soybean (Glycine max L.).

1 reference

12 December 2020

Genomewide structural annotation and evolutionary analysis of the type I MADS-box genes in plants

1 reference

12 December 2020

Ds tagging of BRANCHED FLORETLESS 1 (BFL1) that mediates the transition from spikelet to floret meristem in rice (Oryza sativa L)

1 reference

12 December 2020

Over-expression of OsDREB genes lead to enhanced drought tolerance in rice

1 reference

12 December 2020

The Arabidopsis abscisic acid response locus ABI4 encodes an APETALA 2 domain protein.

1 reference

12 December 2020

The conserved Ala37 in the ERF/AP2 domain is essential for binding with the DRE element and the GCC box.

1 reference

12 December 2020

Isolation and molecular characterization of the Triticum aestivum L. ethylene-responsive factor 1 (TaERF1) that increases multiple stress tolerance

1 reference

12 December 2020

Activation tagging of the LEAFY PETIOLE gene affects leaf petiole development in Arabidopsis thaliana

1 reference

12 December 2020

Overexpression of TaPIEP1, a pathogen-induced ERF gene of wheat, confers host-enhanced resistance to fungal pathogen Bipolaris sorokiniana

1 reference

12 December 2020

The ethylene-, jasmonate-, abscisic acid- and NaCl-responsive tomato transcription factor JERF1 modulates expression of GCC box-containing genes and salt tolerance in tobacco

1 reference

12 December 2020

Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR.

1 reference

12 December 2020

Transcriptional regulation of the ethylene response factor LeERF2 in the expression of ethylene biosynthesis genes controls ethylene production in tomato and tobacco

1 reference

12 December 2020

Ectopic expression of pepper CaPF1 in potato enhances multiple stresses tolerance and delays initiation of in vitro tuberization

1 reference

12 December 2020

Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression

1 reference

12 December 2020

Repression domains of class II ERF transcriptional repressors share an essential motif for active repression

1 reference

12 December 2020

The DORNROSCHEN/ENHANCER OF SHOOT REGENERATION1 gene of Arabidopsis acts in the control of meristem ccll fate and lateral organ development

1 reference

12 December 2020

Overexpression of WXP1, a putative Medicago truncatula AP2 domain-containing transcription factor gene, increases cuticular wax accumulation and enhances drought tolerance in transgenic alfalfa (Medicago sativa).

1 reference

12 December 2020

Isolation and functional characterization of the Ca-DREBLP1 gene encoding a dehydration-responsive element binding-factor-like protein 1 in hot pepper (Capsicum annuum L. cv. Pukang).

1 reference

12 December 2020

LeERF1 positively modulated ethylene triple response on etiolated seedling, plant development and fruit ripening and softening in tomato

1 reference

12 December 2020

Tomato transcription factors pti4, pti5, and pti6 activate defense responses when expressed in Arabidopsis

1 reference

12 December 2020

Repressor- and activator-type ethylene response factors functioning in jasmonate signaling and disease resistance identified via a genome-wide screen of Arabidopsis transcription factor gene expression

1 reference

12 December 2020

The value of prior knowledge in discovering motifs with MEME

1 reference

12 December 2020

Requirement of a CCGAC cis-acting element for cold induction of the BN115 gene from winter Brassica napus

1 reference

12 December 2020

Overexpression of the AP2/EREBP transcription factor OPBP1 enhances disease resistance and salt tolerance in tobacco

1 reference

12 December 2020

The control of spikelet meristem identity by the branched silkless1 gene in maize

1 reference

12 December 2020

Regulation of disease resistance pathways by AP2/ERF transcription factors.

1 reference

12 December 2020

Ectopic overexpression of tomato JERF3 in tobacco activates downstream gene expression and enhances salt tolerance

1 reference

12 December 2020

Functional analysis of tomato Pti4 in Arabidopsis

1 reference

12 December 2020

Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance

1 reference

12 December 2020

Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice

1 reference

12 December 2020

Ethylene biosynthesis and action in tomato: a model for climacteric fruit ripening

1 reference

12 December 2020

The Arabidopsis SUCROSE UNCOUPLED-6 gene is identical to ABSCISIC ACID INSENSITIVE-4: involvement of abscisic acid in sugar responses

1 reference

12 December 2020

TreeView: an application to display phylogenetic trees on personal computers

1 reference

12 December 2020

BOLITA, an Arabidopsis AP2/ERF-like transcription factor that affects cell expansion and proliferation/differentiation pathways.

1 reference

12 December 2020

Components of the Arabidopsis C-repeat/dehydration-responsive element binding factor cold-response pathway are conserved in Brassica napus and other plant species

1 reference

12 December 2020

Expression profile of CBF-like transcriptional factor genes from Eucalyptus in response to cold

1 reference

12 December 2020

Determinants in the sequence specific binding of two plant transcription factors, CBF1 and NtERF2, to the DRE and GCC motifs.

1 reference

12 December 2020

Barley grain with adhering hulls is controlled by an ERF family transcription factor gene regulating a lipid biosynthesis pathway

1 reference

12 December 2020

Transcription factors for predictive plant metabolic engineering: are we there yet?

1 reference

12 December 2020

Identification of Arabidopsis ethylene-responsive element binding factors with distinct induction kinetics after pathogen infection

1 reference

12 December 2020

The tomato transcription factor Pti4 regulates defense-related gene expression via GCC box and non-GCC box cis elements

1 reference

12 December 2020

A novel activator-type ERF of Thinopyrum intermedium, TiERF1, positively regulates defence responses

1 reference

12 December 2020

A Dissociation insertion causes a semidominant mutation that increases expression of TINY, an Arabidopsis gene related to APETALA2.

1 reference

12 December 2020

A seed-specific AP2-domain transcription factor from soybean plays a certain role in regulation of seed germination

1 reference

12 December 2020

Overexpression of Pti5 in tomato potentiates pathogen-induced defense gene expression and enhances disease resistance to Pseudomonas syringae pv. tomato

1 reference

12 December 2020

ORCA3, a jasmonate-responsive transcriptional regulator of plant primary and secondary metabolism

1 reference

12 December 2020

Molecular characterization of four rice genes encoding ethylene-responsive transcriptional factors and their expressions in response to biotic and abiotic stress

1 reference

12 December 2020

Functional analysis of an Arabidopsis transcription factor, DREB2A, involved in drought-responsive gene expression

1 reference

12 December 2020

Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought- and low-temperature-responsive gene expression, respectively, in Arabidopsis.

1 reference

12 December 2020

Sl-ERF2, a tomato ethylene response factor involved in ethylene response and seed germination.

1 reference

12 December 2020

Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses

1 reference

12 December 2020

Differential regulation of tomato ethylene responsive factor LeERF3b, a putative repressor, and the activator Pti4 in ripening mutants and in response to environmental stresses

1 reference

12 December 2020

Role of DREB transcription factors in abiotic and biotic stress tolerance in plants

1 reference

12 December 2020

Fruit ripening mutants yield insights into ripening control

1 reference

12 December 2020

Overexpression of the Arabidopsis CBF3 transcriptional activator mimics multiple biochemical changes associated with cold acclimation

1 reference

12 December 2020

Genome-wide analysis of the AP2/ERF gene family in Populus trichocarpa.

1 reference

12 December 2020

Isolation and functional characterization of the JcERF gene, a putative AP2/EREBP domain-containing transcription factor, in the woody oil plant Jatropha curcas

1 reference

12 December 2020

The pepper transcription factor CaPF1 confers pathogen and freezing tolerance in Arabidopsis

1 reference

12 December 2020

Genome-wide analysis of the ERF gene family in Arabidopsis and rice

1 reference

12 December 2020

CAP3: A DNA sequence assembly program

1 reference

12 December 2020

Functional analysis of rice DREB1/CBF-type transcription factors involved in cold-responsive gene expression in transgenic rice

1 reference

12 December 2020

dwarf and delayed-flowering 1, a novel Arabidopsis mutant deficient in gibberellin biosynthesis because of overexpression of a putative AP2 transcription factor

1 reference

12 December 2020

Genetic regulation of fruit development and ripening

1 reference

12 December 2020

Transcription factor CBF4 is a regulator of drought adaptation in Arabidopsis

1 reference

12 December 2020

ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences

1 reference

12 December 2020

Over-expression GbERF2 transcription factor in tobacco enhances brown spots disease resistance by activating expression of downstream genes

1 reference

12 December 2020

Characterization and phylogenetic analysis of environmental stress-responsive SAP gene family encoding A20/AN1 zinc finger proteins in tomato.

1 reference

12 December 2020

The EAR-motif of the Cys2/His2-type zinc finger protein Zat7 plays a key role in the defense response of Arabidopsis to salinity stress

1 reference

12 December 2020

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

12 December 2020

A novel multifunctional motif in the amino-terminal A/B domain of T3Ralpha modulates DNA binding and receptor dimerization

1 reference

12 December 2020

Control of Arabidopsis flower and seed development by the homeotic gene APETALA2

1 reference

12 December 2020

Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses.

1 reference

12 December 2020

Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes

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12 December 2020

Freezing-sensitive tomato has a functional CBF cold response pathway, but a CBF regulon that differs from that of freezing-tolerant Arabidopsis

1 reference

12 December 2020

A novel mode of DNA recognition by a beta-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA.

1 reference

12 December 2020

A simple and efficient Agrobacterium-mediated procedure for transformation of tomato

1 reference

12 December 2020

Overexpression of a rice OsDREB1F gene increases salt, drought, and low temperature tolerance in both Arabidopsis and rice

1 reference

12 December 2020

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Components of the Arabidopsis C-Repeat/Dehydration-Responsive Element Binding Factor Cold-Response Pathway Are Conserved in<i>Brassica napus</i> and Other Plant Species

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Identifiers

1 reference

17 April 2018

1 reference

17 April 2018