Protein-Mediated and RNA-Based Origins of Replication of Extrachromosomal Mycobacterial Prophages (Q90629800)

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scientific article published on 24 March 2020

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English	Protein-Mediated and RNA-Based Origins of Replication of Extrachromosomal Mycobacterial Prophages	scientific article published on 24 March 2020

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PubMed publication ID

32209683

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32209683%20AND%20SRC:MED&resulttype=core&format=json

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15 April 2020

title

Protein-Mediated and RNA-Based Origins of Replication of Extrachromosomal Mycobacterial Prophages (English)

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PubMed publication ID

32209683

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15 April 2020

author

Graham Hatfull

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5

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PubMed publication ID

32209683

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15 April 2020

author name string

Katherine S Wetzel

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1

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PubMed publication ID

32209683

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15 April 2020

Haley G Aull

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2

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32209683

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15 April 2020

Kira M Zack

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3

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32209683

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15 April 2020

Rebecca A Garlena

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4

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PubMed publication ID

32209683

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15 April 2020

publication date

24 March 2020

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32209683

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15 April 2020

published in

mBio

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Europe PubMed Central

PubMed publication ID

32209683

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32209683%20AND%20SRC:MED&resulttype=core&format=json

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15 April 2020

volume

11

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PubMed publication ID

32209683

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15 April 2020

issue

2

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PubMed publication ID

32209683

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32209683%20AND%20SRC:MED&resulttype=core&format=json

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15 April 2020

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Functional definition of regions necessary for replication and incompatibility in the Mycobacterium fortuitum plasmid pAL5000.

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Mycobacteriophage D29 integrase-mediated recombination: specificity of mycobacteriophage integration

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A new single-copy mycobacterial plasmid, pMF1, from Mycobacterium fortuitum which is compatible with the pAL5000 replicon

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Analysis of the internal replication region of a mycobacterial linear plasmid

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Mycobacteriophage Bxb1 integrates into the Mycobacterium smegmatis groEL1 gene

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Origin pairing ('handcuffing') and unpairing in the control of P1 plasmid replication

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Plasmid partition system of the P1par family from the pWR100 virulence plasmid of Shigella flexneri

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Exploring the mycobacteriophage metaproteome: phage genomics as an educational platform

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Recombineering in Mycobacterium tuberculosis.

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The temperate marine phage PhiHAP-1 of Halomonas aquamarina possesses a linear plasmid-like prophage genome

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Molecular characterization of a variant of Bacillus anthracis-specific phage AP50 with improved bacteriolytic activity

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BRED: a simple and powerful tool for constructing mutant and recombinant bacteriophage genomes

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Non mycobacterial virulence genes in the genome of the emerging pathogen Mycobacterium abscessus

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SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building

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Comparative genomic analysis of 60 Mycobacteriophage genomes: genome clustering, gene acquisition, and gene size

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Characterization of the replication, transfer, and plasmid/lytic phage cycle of the Streptomyces plasmid-phage pZL12

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Pushing and pulling in prokaryotic DNA segregation

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Taking phage integration to the next level as a genetic tool for mycobacteria

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Evolution of Complex Gene Regulatory Circuits by Addition of Refinements

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Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

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Phamerator: a bioinformatic tool for comparative bacteriophage genomics

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Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

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EvolView, an online tool for visualizing, annotating and managing phylogenetic trees

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Phage recombinases and their applications

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On the nature of mycobacteriophage diversity and host preference

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Analysis of novel mycobacteriophages indicates the existence of different strategies for phage inheritance in mycobacteria

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Beyond the chromosome: the prevalence of unique extra-chromosomal bacteriophages with integrated virulence genes in pathogenic Staphylococcus aureus

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Complete Nucleotide Sequence of pVv01, a P1-Like Plasmid Prophage of Vibrio vulnificus

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Identification of three extra-chromosomal replicons in Leptospira pathogenic strain and development of new shuttle vectors.

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Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity

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Plasmid Replication Control by Antisense RNAs

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Replication and Maintenance of Linear Phage-Plasmid N15.

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The λ Integrase Site-specific Recombination Pathway

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Phage-encoded Serine Integrases and Other Large Serine Recombinases.

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Function, expression, specificity, diversity and incompatibility of actinobacteriophage parABS systems

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Prophage-mediated defence against viral attack and viral counter-defence

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PhagesDB: the actinobacteriophage database

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Complete Genome Sequences of Cluster A Mycobacteriophages BobSwaget, Fred313, KADY, Lokk, MyraDee, Stagni, and StepMih.

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Sequencing, Assembling, and Finishing Complete Bacteriophage Genomes

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Extra-Chromosomal DNA Sequencing Reveals Episomal Prophages Capable of Impacting Virulence Factor Expression in Staphylococcus aureus.

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Mycobacteriophages

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12 December 2020

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Yet More Evidence of Collusion: a New Viral Defense System Encoded by Phage CarolAnn

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Evolution of Superinfection Immunity in Cluster A Mycobacteriophages

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Identifiers

DOI

10.1128/MBIO.00385-20

1 reference

stated in

Europe PubMed Central

PubMed publication ID

32209683

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32209683%20AND%20SRC:MED&resulttype=core&format=json

retrieved

15 April 2020

PubMed publication ID

32209683

1 reference

stated in

Europe PubMed Central

PubMed publication ID

32209683

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32209683%20AND%20SRC:MED&resulttype=core&format=json

retrieved

15 April 2020

 

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