OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes (Q27860860)

From Wikidata

Jump to navigation Jump to search

scientific article (publication date: September 2003)

edit

Language	Label	Description	Also known as
English	OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes	scientific article (publication date: September 2003)

Statements

instance of

scholarly article

0 references

title

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes (English)

0 references

author

David S Roos

object named as

David S Roos

series ordinal

3

0 references

Christian J Stoeckert

series ordinal

2

object named as

Christian J Stoeckert

0 references

author name string

Li Li

series ordinal

1

0 references

language of work or name

English

1 reference

based on heuristic

inferred from title

publication date

September 2003

0 references

published in

Genome Research

0 references

volume

13

0 references

issue

9

0 references

page(s)

2178-89

0 references

cites work

Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

20 March 2017

Genome sequence of the human malaria parasite Plasmodium falciparum

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

20 March 2017

Towards understanding the first genome sequence of a crenarchaeon by genome annotation using clusters of orthologous groups of proteins (COGs)

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

20 March 2017

The COG database: new developments in phylogenetic classification of proteins from complete genomes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

20 March 2017

Gene ontology: tool for the unification of biology

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

20 March 2017

A genomic perspective on protein families

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

20 March 2017

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

20 March 2017

The COG database: a tool for genome-scale analysis of protein functions and evolution

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

20 March 2017

An efficient algorithm for large-scale detection of protein families

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

20 March 2017

Gene families: the taxonomy of protein paralogs and chimeras

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

20 March 2017

Comparative genomics of the eukaryotes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

7 April 2017

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

7 April 2017

Creating the gene ontology resource: design and implementation

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

7 April 2017

Distinguishing Homologous from Analogous Proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

7 April 2017

Homology a personal view on some of the problems

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

9 May 2017

PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

Predicting gene ontology functions from ProDom and CDD protein domains

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

Cross-referencing eukaryotic genomes: TIGR Orthologous Gene Alignments (TOGA)

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

A plastid segregation defect in the protozoan parasite Toxoplasma gondii

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

Using the COG database to improve gene recognition in complete genomes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

The TIGR Gene Indices: analysis of gene transcript sequences in highly sampled eukaryotic species

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

Searching for drug targets in microbial genomes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

The TIGR gene indices: reconstruction and representation of expressed gene sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

Human and nematode orthologs--lessons from the analysis of 1800 human genes and the proteome of Caenorhabditis elegans

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

Comparison of the complete protein sets of worm and yeast: orthology and divergence

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

Large-scale taxonomic profiling of eukaryotic model organisms: a comparison of orthologous proteins encoded by the human, fly, nematode, and yeast genomes.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

A plastid of probable green algal origin in Apicomplexan parasites.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

The multiplicity of domains in proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

29 September 2017

A plastid organelle as a drug target in apicomplexan parasites.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

2 June 2018

The Plasmodium genome database

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

27 November 2018

Clustering of proximal sequence space for the identification of protein families

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

27 November 2018

The apicoplast as a potential therapeutic target in Toxoplasma and other apicomplexan parasites: some additional thoughts

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403725

retrieved

27 November 2018

A hot story from comparative genomics: reverse gyrase is the only hyperthermophile-specific protein

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/12952885

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1101/GR.1224503

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

189399

OpenCitations bibliographic resource ID

189399

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

189399

PMC publication ID

403725

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

189399

PubMed publication ID

12952885

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

189399

ResearchGate publication ID

10584987

0 references

 

Sitelinks

Wikipedia(0 entries)

edit

Wikibooks(0 entries)

edit

Wikinews(0 entries)

edit

Wikiquote(0 entries)

edit

Wikisource(0 entries)

edit

Wikiversity(0 entries)

edit

Wikivoyage(0 entries)

edit

Wiktionary(0 entries)

edit

Multilingual sites(0 entries)

edit

Retrieved from "https://www.wikidata.org/w/index.php?title=Q27860860&oldid=1603542618"