Orthologs, paralogs and genome comparisons (Q33801581)

29 July 2017

1 reference

title

Orthologs, paralogs and genome comparisons (English)

1 reference

29 July 2017

author

Johann Peter Gogarten

series ordinal

1

object named as

J P Gogarten

1 reference

29 July 2017

L Olendzenski

2

1 reference

29 July 2017

publication date

1 December 1999

1 reference

Current Opinion in Genetics & Development

29 July 2017

published in

1 reference

29 July 2017

volume

9

1 reference

29 July 2017

issue

6

1 reference

29 July 2017

page(s)

630-636

1 reference

How long did it take for life to begin and evolve to cyanobacteria?

29 July 2017

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

1 reference

7 January 2021

Comparison of the complete protein sets of worm and yeast: orthology and divergence

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Distinguishing Homologous from Analogous Proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Phylogenetic origins and adaptive evolution of avian and mammalian haemoglobin genes

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Which is the most conserved group of proteins? Homology-orthology, paralogy, xenology, and the fusion of independent lineages.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

MICROBIAL DIVERSITY: Domains and Kingdoms

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Comparison of archaeal and bacterial genomes: computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Horizontal transfer of ATPase genes--the tree of life becomes a net of life

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Phylogenetic classification and the universal tree

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

The evolution of the Calvin cycle from prokaryotic to eukaryotic chromosomes: a case study of functional redundancy in ancient pathways through endosymbiosis.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Improved tools for biological sequence comparison

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Basic local alignment search tool

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Convergent evolution of amino acid usage in archaebacterial and eubacterial lineages adapted to high salt

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Rapid and sensitive protein similarity searches

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Convergent evolution: the need to be explicit

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

The prokaryote-to-eukaryote transition reflected in the evolution of the V/F/A-ATPase catalytic and proteolipid subunits

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Salmonella typhimurium mutants defective in flagellar filament regrowth and sequence similarity of FliI to F0F1, vacuolar, and archaebacterial ATPase subunits

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Phylogenetic analysis of sequences from diverse bacteria with homology to the Escherichia coli rho gene

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Widespread protein sequence similarities: origins of Escherichia coli genes

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Protein evolution viewed through Escherichia coli protein sequences: introducing the notion of a structural segment of homology, the module.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

A common fold for peptide synthetases cleaving ATP to ADP: glutathione synthetase and D-alanine:d-alanine ligase of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Crystal structure of glutathione synthetase at optimal pH: domain architecture and structural similarity with other proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Protein sequence similarity searches using patterns as seeds

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Structural assignments to the Mycoplasma genitalium proteins show extensive gene duplications and domain rearrangements

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Phylogenetic characterization of novel transport protein families revealed by genome analyses

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Microbial genome analyses: global comparisons of transport capabilities based on phylogenies, bioenergetics and substrate specificities

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Gleaning non-trivial structural, functional and evolutionary information about proteins by iterative database searches

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Beyond complete genomes: from sequence to structure and function

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Origins of Prokaryotes, Eukaryotes, Mitochondria, and Chloroplasts

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Evolution of proton pumping ATPases: Rooting the tree of life

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Evolution of the vacuolar H+-ATPase: implications for the origin of eukaryotes

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Evolutionary relationship of archaebacteria, eubacteria, and eukaryotes inferred from phylogenetic trees of duplicated genes

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Early evolutionary relationships among known life forms inferred from elongation factor EF-2/EF-G sequences: phylogenetic coherence and structure of the archaeal domain.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

The root of the universal tree and the origin of eukaryotes based on elongation factor phylogeny.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Root of the universal tree of life based on ancient aminoacyl-tRNA synthetase gene duplications

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

The root of the universal tree of life inferred from anciently duplicated genes encoding components of the protein-targeting machinery

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Transcription factor IID in the Archaea: sequences in the Thermococcus celer genome would encode a product closely related to the TATA-binding protein of eukaryotes

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

The TATA-binding protein: a general transcription factor in eukaryotes and archaebacteria

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Cloning of the HSP70 gene from Halobacterium marismortui: relatedness of archaebacterial HSP70 to its eubacterial homologs and a model for the evolution of the HSP70 gene

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Evolution of HSP70 gene and its implications regarding relationships between archaebacteria, eubacteria, and eukaryotes

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

The nature of the last universal ancestor and the root of the tree of life, still open questions

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

The early evolution of cellular life.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

The universal ancestor

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Archaea: narrowing the gap between prokaryotes and eukaryotes

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

The hydrogen hypothesis for the first eukaryote

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Was the nucleus the first endosymbiont?

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Gene Duplication and Gene Conversion in the Caenorhabditis elegans Genome

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Molecular evidence for an ancient duplication of the entire yeast genome

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Extent of genomic rearrangement after genome duplication in yeast

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Evidence for Ancient Tetraploidy and Conservation of Linkage Groups in Mammalian Chromosomes

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Evolution of the vertebrate genome as reflected in paralogous chromosomal regions in man and the house mouse

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Vertebrate genome evolution and the zebrafish gene map

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Ancient large-scale genome duplications: phylogenetic and linkage analyses shed light on chordate genome evolution

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Eukaryote genome duplication - where's the evidence?

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Vertebrate genome evolution--the decade ahead

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Evidence of independent gene duplications during the evolution of archaeal and eukaryotic family B DNA polymerases

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

The evolution of the type I interferons

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Fine-resolution analysis of products of intrachromosomal homeologous recombination in mammalian cells

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

Fine-resolution mapping of spontaneous and double-strand break-induced gene conversion tracts in Saccharomyces cerevisiae reveals reversible mitotic conversion polarity

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2899%2900029-5

7 January 2021

10.1016/S0959-437X(99)00029-5

Identifiers

DOI

1 reference

release_s2dq6mrk7jboxmrkhs2soybwni

29 July 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/s2dq6mrk7jboxmrkhs2soybwni

24 November 2022

mapped directly with Wikidata item

1 reference