Nascent-peptide-mediated ribosome stalling at a stop codon induces mRNA cleavage resulting in nonstop mRNA that is recognized by tmRNA. (Q41998478)

15 October 2017

Nascent-peptide-mediated ribosome stalling at a stop codon induces mRNA cleavage resulting in nonstop mRNA that is recognized by tmRNA. (English)

1 reference

15 October 2017

Takafumi Sunohara

1

1 reference

15 October 2017

Kaoru Jojima

2

1 reference

15 October 2017

Yasufumi Yamamoto

3

1 reference

15 October 2017

Toshifumi Inada

4

1 reference

15 October 2017

Hiroji Aiba

5

1 reference

15 October 2017

language of work or name

English

0 references

publication date

1 March 2004

1 reference

15 October 2017

1 reference

15 October 2017

10

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15 October 2017

3

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15 October 2017

378-386

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Toxin-antitoxin loci as stress-response-elements: ChpAK/MazF and ChpBK cleave translated RNAs and are counteracted by tmRNA.

15 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

SsrA-mediated trans-translation plays a role in mRNA quality control by facilitating degradation of truncated mRNAs

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

The C-terminal amino acid sequence of nascent peptide is a major determinant of SsrA tagging at all three stop codons

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

The ribosomal exit tunnel functions as a discriminating gate

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

Stop codons preceded by rare arginine codons are efficient determinants of SsrA tagging in Escherichia coli

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

A tripeptide sequence within the nascent DaaP protein is required for mRNA processing of a fimbrial operon in Escherichia coli

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

SsrA-mediated tagging and proteolysis of LacI and its role in the regulation of lac operon

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

The SsrA-SmpB system for protein tagging, directed degradation and ribosome rescue

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

SsrA-mediated peptide tagging caused by rare codons and tRNA scarcity

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

Ribosome regulation by the nascent peptide

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

The Escherichia coli ribosomal protein S16 is an endonuclease

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

Molecular cloning and nucleotide sequencing of the gene for E. coli cAMP receptor protein

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

Production and properties of the α core derived from the cyclic adenosine monophosphate receptor protein of Escherichia coli

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

RelE toxins from bacteria and Archaea cleave mRNAs on translating ribosomes, which are rescued by tmRNA.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

Instruction of translating ribosome by nascent peptide

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

Competition between SsrA tagging and translational termination at weak stop codons in Escherichia coli.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

Proline residues at the C terminus of nascent chains induce SsrA tagging during translation termination

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

SsrA-mediated protein tagging in the presence of miscoding drugs and its physiological role in Escherichia coli.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

Bacterial SsrA system plays a role in coping with unwanted translational readthrough caused by suppressor tRNAs.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370933

Cleavage of the A site mRNA codon during ribosome pausing provides a mechanism for translational quality control

18 August 2018

1 reference

12 December 2020

Evidence for two functional gal promoters in intact Escherichia coli cells

1 reference

12 December 2020

Regulation of intrinsic terminator by translation in Escherichia coli: transcription termination at a distance downstream

1 reference

12 December 2020

Endonuclease cleavage of messenger RNA in Bacillus subtilis

1 reference

12 December 2020

The Bacterial Toxin RelE Displays Codon-Specific Cleavage of mRNAs in the Ribosomal A Site

1 reference

12 December 2020

Identifiers

DOI

10.1261/RNA.5169404

1 reference

release_urk7wd7dgvcf3cep5cmt54ul44

15 October 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/urk7wd7dgvcf3cep5cmt54ul44

24 November 2022

mapped directly with Wikidata item

1 reference

15 October 2017

PubMed publication ID

14970383

1 reference